Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc1r1Q9CYQ5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcfc1r1Q9CYQ5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcfc1r1Q9CYQ5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hcfc1r1Q9CYQ5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcfc1r1Q9CYQ5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hcfc1r1Q9CYQ5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Hcfc1r1Q9CYQ5 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcfc1r1Q9CYQ5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hcfc1r1Q9CYQ5 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.49■□□□□ 0.71
Hcfc1r1Q9CYQ5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.49■□□□□ 0.71
Hcfc1r1Q9CYQ5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcfc1r1Q9CYQ5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc1r1Q9CYQ5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc1r1Q9CYQ5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc1r1Q9CYQ5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc1r1Q9CYQ5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc1r1Q9CYQ5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.47■□□□□ 0.71
Hcfc1r1Q9CYQ5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.46■□□□□ 0.71
Hcfc1r1Q9CYQ5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcfc1r1Q9CYQ5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hcfc1r1Q9CYQ5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcfc1r1Q9CYQ5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcfc1r1Q9CYQ5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
Hcfc1r1Q9CYQ5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcfc1r1Q9CYQ5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hcfc1r1Q9CYQ5 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
Hcfc1r1Q9CYQ5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.43■□□□□ 0.7
Hcfc1r1Q9CYQ5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcfc1r1Q9CYQ5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcfc1r1Q9CYQ5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcfc1r1Q9CYQ5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc1r1Q9CYQ5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Hcfc1r1Q9CYQ5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hcfc1r1Q9CYQ5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hcfc1r1Q9CYQ5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hcfc1r1Q9CYQ5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hcfc1r1Q9CYQ5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Hcfc1r1Q9CYQ5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcfc1r1Q9CYQ5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcfc1r1Q9CYQ5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcfc1r1Q9CYQ5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcfc1r1Q9CYQ5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hcfc1r1Q9CYQ5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hcfc1r1Q9CYQ5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Gm45855-201ENSMUST00000212546 880 ntBASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.35■□□□□ 0.69
Hcfc1r1Q9CYQ5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms