Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25,53■■□□□ 1,68
Chd1lQ9CXF7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25,52■■□□□ 1,68
Chd1lQ9CXF7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Chd1lQ9CXF7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Chd1lQ9CXF7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25,52■■□□□ 1,68
Chd1lQ9CXF7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25,52■■□□□ 1,68
Chd1lQ9CXF7 Gm6934-201ENSMUST00000194780 1905 ntBASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25,51■■□□□ 1,67
Chd1lQ9CXF7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Chd1lQ9CXF7 Zfp131-205ENSMUST00000223812 663 ntBASIC25,5■■□□□ 1,67
Chd1lQ9CXF7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Chd1lQ9CXF7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Chd1lQ9CXF7 Gm26766-202ENSMUST00000227544 2347 ntBASIC25,49■■□□□ 1,67
Chd1lQ9CXF7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25,49■■□□□ 1,67
Chd1lQ9CXF7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25,49■■□□□ 1,67
Chd1lQ9CXF7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Chd1lQ9CXF7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25,48■■□□□ 1,67
Chd1lQ9CXF7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25,48■■□□□ 1,67
Chd1lQ9CXF7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Chd1lQ9CXF7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Chd1lQ9CXF7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25,47■■□□□ 1,67
Chd1lQ9CXF7 Gm38160-201ENSMUST00000193090 2499 ntBASIC25,46■■□□□ 1,67
Chd1lQ9CXF7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25,46■■□□□ 1,67
Chd1lQ9CXF7 Gm24970-201ENSMUST00000175582 82 ntBASIC25,46■■□□□ 1,67
Chd1lQ9CXF7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25,45■■□□□ 1,66
Chd1lQ9CXF7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Gm4419-202ENSMUST00000226239 1431 ntBASIC25,44■■□□□ 1,66
Chd1lQ9CXF7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25,43■■□□□ 1,66
Chd1lQ9CXF7 Gm9397-201ENSMUST00000200125 605 ntBASIC25,43■■□□□ 1,66
Chd1lQ9CXF7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25,43■■□□□ 1,66
Chd1lQ9CXF7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25,42■■□□□ 1,66
Chd1lQ9CXF7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25,41■■□□□ 1,66
Chd1lQ9CXF7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25,4■■□□□ 1,66
Chd1lQ9CXF7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Chd1lQ9CXF7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25,39■■□□□ 1,66
Chd1lQ9CXF7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25,39■■□□□ 1,66
Chd1lQ9CXF7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25,39■■□□□ 1,66
Chd1lQ9CXF7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25,39■■□□□ 1,65
Chd1lQ9CXF7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25,39■■□□□ 1,65
Chd1lQ9CXF7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25,38■■□□□ 1,65
Chd1lQ9CXF7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25,38■■□□□ 1,65
Chd1lQ9CXF7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Chd1lQ9CXF7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Chd1lQ9CXF7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Chd1lQ9CXF7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Chd1lQ9CXF7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Chd1lQ9CXF7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25,34■■□□□ 1,65
Chd1lQ9CXF7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Chd1lQ9CXF7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25,33■■□□□ 1,65
Chd1lQ9CXF7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25,33■■□□□ 1,65
Chd1lQ9CXF7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25,33■■□□□ 1,65
Chd1lQ9CXF7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25,33■■□□□ 1,65
Chd1lQ9CXF7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,64
Chd1lQ9CXF7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Chd1lQ9CXF7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25,32■■□□□ 1,64
Chd1lQ9CXF7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Chd1lQ9CXF7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Chd1lQ9CXF7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25,31■■□□□ 1,64
Chd1lQ9CXF7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Chd1lQ9CXF7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25,31■■□□□ 1,64
Chd1lQ9CXF7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25,3■■□□□ 1,64
Chd1lQ9CXF7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25,3■■□□□ 1,64
Chd1lQ9CXF7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Chd1lQ9CXF7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25,29■■□□□ 1,64
Chd1lQ9CXF7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Retrieved 100 of 76,532 protein–RNA pairs in 16,5 ms