Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pfdn1Q9CWM4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pfdn1Q9CWM4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pfdn1Q9CWM4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Pfdn1Q9CWM4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pfdn1Q9CWM4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.83■□□□□ 0.76
Pfdn1Q9CWM4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pfdn1Q9CWM4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pfdn1Q9CWM4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn1Q9CWM4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn1Q9CWM4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn1Q9CWM4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn1Q9CWM4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn1Q9CWM4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn1Q9CWM4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn1Q9CWM4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.81■□□□□ 0.76
Pfdn1Q9CWM4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.81■□□□□ 0.76
Pfdn1Q9CWM4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pfdn1Q9CWM4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn1Q9CWM4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn1Q9CWM4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn1Q9CWM4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn1Q9CWM4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn1Q9CWM4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn1Q9CWM4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn1Q9CWM4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn1Q9CWM4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pfdn1Q9CWM4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn1Q9CWM4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn1Q9CWM4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn1Q9CWM4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.77■□□□□ 0.76
Pfdn1Q9CWM4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pfdn1Q9CWM4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn1Q9CWM4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn1Q9CWM4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn1Q9CWM4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn1Q9CWM4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn1Q9CWM4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn1Q9CWM4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn1Q9CWM4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn1Q9CWM4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Pfdn1Q9CWM4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn1Q9CWM4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn1Q9CWM4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.73■□□□□ 0.75
Pfdn1Q9CWM4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pfdn1Q9CWM4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn1Q9CWM4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Pfdn1Q9CWM4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn1Q9CWM4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn1Q9CWM4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn1Q9CWM4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn1Q9CWM4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn1Q9CWM4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn1Q9CWM4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn1Q9CWM4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn1Q9CWM4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.69■□□□□ 0.74
Pfdn1Q9CWM4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn1Q9CWM4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn1Q9CWM4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn1Q9CWM4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn1Q9CWM4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn1Q9CWM4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn1Q9CWM4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms