Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.35■■□□□ 1.17
Lrrc40Q9CRC8 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.35■■□□□ 1.17
Lrrc40Q9CRC8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc40Q9CRC8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Lrrc40Q9CRC8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc40Q9CRC8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrc40Q9CRC8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lrrc40Q9CRC8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lrrc40Q9CRC8 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.33■■□□□ 1.17
Lrrc40Q9CRC8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc40Q9CRC8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.32■■□□□ 1.16
Lrrc40Q9CRC8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrc40Q9CRC8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Lrrc40Q9CRC8 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.31■■□□□ 1.16
Lrrc40Q9CRC8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrc40Q9CRC8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrc40Q9CRC8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Lrrc40Q9CRC8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrc40Q9CRC8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc40Q9CRC8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrc40Q9CRC8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc40Q9CRC8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.27■■□□□ 1.16
Lrrc40Q9CRC8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Lrrc40Q9CRC8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.15
Lrrc40Q9CRC8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Gm45364-201ENSMUST00000210883 159 ntBASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc40Q9CRC8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc40Q9CRC8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc40Q9CRC8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Lrrc40Q9CRC8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.23■■□□□ 1.15
Lrrc40Q9CRC8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrc40Q9CRC8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrc40Q9CRC8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.22■■□□□ 1.15
Lrrc40Q9CRC8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrc40Q9CRC8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrc40Q9CRC8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrc40Q9CRC8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrc40Q9CRC8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.21■■□□□ 1.15
Lrrc40Q9CRC8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrc40Q9CRC8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.21■■□□□ 1.15
Lrrc40Q9CRC8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Lrrc40Q9CRC8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Terc-201ENSMUST00000082862 423 ntBASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc40Q9CRC8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc40Q9CRC8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc40Q9CRC8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc40Q9CRC8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc40Q9CRC8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.18■■□□□ 1.14
Lrrc40Q9CRC8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc40Q9CRC8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc40Q9CRC8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Lrrc40Q9CRC8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc40Q9CRC8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc40Q9CRC8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc40Q9CRC8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc40Q9CRC8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc40Q9CRC8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc40Q9CRC8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc40Q9CRC8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc40Q9CRC8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc40Q9CRC8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc40Q9CRC8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc40Q9CRC8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms