Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.04■□□□□ 0.96
Chmp1b1Q99LU0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp1b1Q99LU0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp1b1Q99LU0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.03■□□□□ 0.96
Chmp1b1Q99LU0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp1b1Q99LU0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp1b1Q99LU0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp1b1Q99LU0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp1b1Q99LU0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp1b1Q99LU0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp1b1Q99LU0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp1b1Q99LU0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp1b1Q99LU0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp1b1Q99LU0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp1b1Q99LU0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chmp1b1Q99LU0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1b1Q99LU0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.99■□□□□ 0.95
Chmp1b1Q99LU0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp1b1Q99LU0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp1b1Q99LU0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp1b1Q99LU0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp1b1Q99LU0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.97■□□□□ 0.95
Chmp1b1Q99LU0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp1b1Q99LU0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chmp1b1Q99LU0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp1b1Q99LU0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chmp1b1Q99LU0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.96■□□□□ 0.95
Chmp1b1Q99LU0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp1b1Q99LU0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp1b1Q99LU0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chmp1b1Q99LU0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1b1Q99LU0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1b1Q99LU0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp1b1Q99LU0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp1b1Q99LU0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp1b1Q99LU0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp1b1Q99LU0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp1b1Q99LU0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.91■□□□□ 0.94
Chmp1b1Q99LU0 Gm6311-201ENSMUST00000073790 878 ntBASIC20.91■□□□□ 0.94
Chmp1b1Q99LU0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp1b1Q99LU0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.9■□□□□ 0.94
Chmp1b1Q99LU0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp1b1Q99LU0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp1b1Q99LU0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp1b1Q99LU0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.89■□□□□ 0.94
Chmp1b1Q99LU0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.89■□□□□ 0.93
Chmp1b1Q99LU0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp1b1Q99LU0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp1b1Q99LU0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp1b1Q99LU0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Chmp1b1Q99LU0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1b1Q99LU0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1b1Q99LU0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1b1Q99LU0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp1b1Q99LU0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1b1Q99LU0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1b1Q99LU0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.87■□□□□ 0.93
Chmp1b1Q99LU0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1b1Q99LU0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chmp1b1Q99LU0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp1b1Q99LU0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.86■□□□□ 0.93
Chmp1b1Q99LU0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.86■□□□□ 0.93
Chmp1b1Q99LU0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.85■□□□□ 0.93
Chmp1b1Q99LU0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp1b1Q99LU0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp1b1Q99LU0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp1b1Q99LU0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms