Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhac1Q91Y10 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.89■□□□□ 0.94
Pcdhac1Q91Y10 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhac1Q91Y10 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhac1Q91Y10 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhac1Q91Y10 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhac1Q91Y10 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhac1Q91Y10 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhac1Q91Y10 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhac1Q91Y10 Gm11599-201ENSMUST00000118720 878 ntBASIC20.87■□□□□ 0.93
Pcdhac1Q91Y10 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhac1Q91Y10 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhac1Q91Y10 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhac1Q91Y10 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdhac1Q91Y10 Gm37136-201ENSMUST00000194368 194 ntBASIC20.86■□□□□ 0.93
Pcdhac1Q91Y10 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhac1Q91Y10 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhac1Q91Y10 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhac1Q91Y10 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhac1Q91Y10 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhac1Q91Y10 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhac1Q91Y10 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhac1Q91Y10 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhac1Q91Y10 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhac1Q91Y10 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhac1Q91Y10 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.83■□□□□ 0.92
Pcdhac1Q91Y10 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhac1Q91Y10 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhac1Q91Y10 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.82■□□□□ 0.92
Pcdhac1Q91Y10 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhac1Q91Y10 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhac1Q91Y10 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhac1Q91Y10 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhac1Q91Y10 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdhac1Q91Y10 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhac1Q91Y10 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhac1Q91Y10 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhac1Q91Y10 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Pcdhac1Q91Y10 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhac1Q91Y10 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhac1Q91Y10 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhac1Q91Y10 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhac1Q91Y10 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhac1Q91Y10 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhac1Q91Y10 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhac1Q91Y10 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhac1Q91Y10 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhac1Q91Y10 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.72■□□□□ 0.91
Pcdhac1Q91Y10 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhac1Q91Y10 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms