Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb1Q91Y08 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb1Q91Y08 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb1Q91Y08 Terc-201ENSMUST00000082862 423 ntBASIC23.41■■□□□ 1.34
Pcdhb1Q91Y08 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb1Q91Y08 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb1Q91Y08 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb1Q91Y08 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.4■■□□□ 1.34
Pcdhb1Q91Y08 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb1Q91Y08 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhb1Q91Y08 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb1Q91Y08 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb1Q91Y08 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.39■■□□□ 1.33
Pcdhb1Q91Y08 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb1Q91Y08 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb1Q91Y08 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb1Q91Y08 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.37■■□□□ 1.33
Pcdhb1Q91Y08 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb1Q91Y08 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.37■■□□□ 1.33
Pcdhb1Q91Y08 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb1Q91Y08 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb1Q91Y08 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb1Q91Y08 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.34■■□□□ 1.33
Pcdhb1Q91Y08 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhb1Q91Y08 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb1Q91Y08 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb1Q91Y08 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 Gm6311-201ENSMUST00000073790 878 ntBASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb1Q91Y08 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb1Q91Y08 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.32■■□□□ 1.32
Pcdhb1Q91Y08 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb1Q91Y08 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Pcdhb1Q91Y08 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb1Q91Y08 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb1Q91Y08 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
Pcdhb1Q91Y08 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Pcdhb1Q91Y08 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb1Q91Y08 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb1Q91Y08 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb1Q91Y08 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb1Q91Y08 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhb1Q91Y08 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhb1Q91Y08 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhb1Q91Y08 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.27■■□□□ 1.32
Pcdhb1Q91Y08 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb1Q91Y08 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb1Q91Y08 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb1Q91Y08 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb1Q91Y08 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhb1Q91Y08 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb1Q91Y08 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb1Q91Y08 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb1Q91Y08 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb1Q91Y08 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms