Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb4Q91XZ6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb4Q91XZ6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb4Q91XZ6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb4Q91XZ6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb4Q91XZ6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Pcdhb4Q91XZ6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb4Q91XZ6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb4Q91XZ6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Pcdhb4Q91XZ6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb4Q91XZ6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb4Q91XZ6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhb4Q91XZ6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb4Q91XZ6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms