Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Odf4Q8VI88 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Odf4Q8VI88 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Odf4Q8VI88 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Odf4Q8VI88 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Odf4Q8VI88 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Cap2-205ENSMUST00000225824 1634 ntBASIC19.84■□□□□ 0.77
Odf4Q8VI88 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Odf4Q8VI88 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Odf4Q8VI88 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Odf4Q8VI88 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Odf4Q8VI88 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Odf4Q8VI88 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Odf4Q8VI88 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Odf4Q8VI88 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Odf4Q8VI88 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.82■□□□□ 0.76
Odf4Q8VI88 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.82■□□□□ 0.76
Odf4Q8VI88 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Odf4Q8VI88 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.82■□□□□ 0.76
Odf4Q8VI88 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Odf4Q8VI88 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Odf4Q8VI88 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Odf4Q8VI88 Scarna2-201ENSMUST00000157560 414 ntBASIC19.81■□□□□ 0.76
Odf4Q8VI88 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Odf4Q8VI88 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Odf4Q8VI88 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Odf4Q8VI88 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Odf4Q8VI88 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.79■□□□□ 0.76
Odf4Q8VI88 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Odf4Q8VI88 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Odf4Q8VI88 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Odf4Q8VI88 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Odf4Q8VI88 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Odf4Q8VI88 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Odf4Q8VI88 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.78■□□□□ 0.76
Odf4Q8VI88 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Odf4Q8VI88 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Gm11687-201ENSMUST00000118911 886 ntBASIC19.77■□□□□ 0.76
Odf4Q8VI88 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Odf4Q8VI88 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Odf4Q8VI88 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.76■□□□□ 0.75
Odf4Q8VI88 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Odf4Q8VI88 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Odf4Q8VI88 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Odf4Q8VI88 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
Odf4Q8VI88 Gm9806-201ENSMUST00000051080 552 ntBASIC19.75■□□□□ 0.75
Odf4Q8VI88 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Odf4Q8VI88 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Odf4Q8VI88 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Odf4Q8VI88 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Odf4Q8VI88 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Odf4Q8VI88 Mir3960-201ENSMUST00000198213 73 ntBASIC19.74■□□□□ 0.75
Odf4Q8VI88 Gm16437-201ENSMUST00000025669 507 ntBASIC19.74■□□□□ 0.75
Odf4Q8VI88 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.74■□□□□ 0.75
Odf4Q8VI88 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Odf4Q8VI88 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Odf4Q8VI88 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Odf4Q8VI88 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Odf4Q8VI88 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Odf4Q8VI88 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Odf4Q8VI88 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Odf4Q8VI88 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Odf4Q8VI88 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Odf4Q8VI88 Gm37136-201ENSMUST00000194368 194 ntBASIC19.72■□□□□ 0.75
Odf4Q8VI88 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.72■□□□□ 0.75
Odf4Q8VI88 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Odf4Q8VI88 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Odf4Q8VI88 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Odf4Q8VI88 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Odf4Q8VI88 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Odf4Q8VI88 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Odf4Q8VI88 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms