Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3aQ8VHT7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3aQ8VHT7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf3aQ8VHT7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3aQ8VHT7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Gm14523-201ENSMUST00000117260 558 ntBASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Gm7332-201ENSMUST00000118351 454 ntBASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3aQ8VHT7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.4■□□□□ 0.7
Gtf3aQ8VHT7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.4■□□□□ 0.7
Gtf3aQ8VHT7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3aQ8VHT7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gtf3aQ8VHT7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gtf3aQ8VHT7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf3aQ8VHT7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf3aQ8VHT7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3aQ8VHT7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3aQ8VHT7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3aQ8VHT7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3aQ8VHT7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3aQ8VHT7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Gtf3aQ8VHT7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3aQ8VHT7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3aQ8VHT7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.38■□□□□ 0.69
Gtf3aQ8VHT7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3aQ8VHT7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3aQ8VHT7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3aQ8VHT7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Gtf3aQ8VHT7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3aQ8VHT7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3aQ8VHT7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3aQ8VHT7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3aQ8VHT7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3aQ8VHT7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Gtf3aQ8VHT7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3aQ8VHT7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3aQ8VHT7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3aQ8VHT7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.33■□□□□ 0.68
Gtf3aQ8VHT7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.33■□□□□ 0.68
Gtf3aQ8VHT7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3aQ8VHT7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3aQ8VHT7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3aQ8VHT7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3aQ8VHT7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Gtf3aQ8VHT7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3aQ8VHT7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3aQ8VHT7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gtf3aQ8VHT7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3aQ8VHT7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3aQ8VHT7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gtf3aQ8VHT7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3aQ8VHT7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.28■□□□□ 0.68
Gtf3aQ8VHT7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3aQ8VHT7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gtf3aQ8VHT7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gtf3aQ8VHT7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gtf3aQ8VHT7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3aQ8VHT7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gtf3aQ8VHT7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gtf3aQ8VHT7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3aQ8VHT7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3aQ8VHT7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3aQ8VHT7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3aQ8VHT7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
Gtf3aQ8VHT7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms