Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Gm5921-201ENSMUST00000075898 882 ntBASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.93■■□□□ 1.1
Cdhr1Q8VHP6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdhr1Q8VHP6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdhr1Q8VHP6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Cdhr1Q8VHP6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cdhr1Q8VHP6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdhr1Q8VHP6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdhr1Q8VHP6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.83■■□□□ 1.08
Cdhr1Q8VHP6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdhr1Q8VHP6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms