Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf130Q8VEM1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
Rnf130Q8VEM1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf130Q8VEM1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Rnf130Q8VEM1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf130Q8VEM1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf130Q8VEM1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf130Q8VEM1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Rnf130Q8VEM1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf130Q8VEM1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rnf130Q8VEM1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf130Q8VEM1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rnf130Q8VEM1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf130Q8VEM1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf130Q8VEM1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf130Q8VEM1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf130Q8VEM1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf130Q8VEM1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf130Q8VEM1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf130Q8VEM1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf130Q8VEM1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf130Q8VEM1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf130Q8VEM1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf130Q8VEM1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.04■□□□□ 0.96
Rnf130Q8VEM1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf130Q8VEM1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Gm4799-201ENSMUST00000095396 657 ntBASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf130Q8VEM1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf130Q8VEM1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf130Q8VEM1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf130Q8VEM1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf130Q8VEM1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf130Q8VEM1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf130Q8VEM1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf130Q8VEM1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf130Q8VEM1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.98■□□□□ 0.95
Rnf130Q8VEM1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf130Q8VEM1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.98■□□□□ 0.95
Rnf130Q8VEM1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rnf130Q8VEM1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf130Q8VEM1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf130Q8VEM1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf130Q8VEM1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf130Q8VEM1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf130Q8VEM1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf130Q8VEM1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf130Q8VEM1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf130Q8VEM1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rnf130Q8VEM1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms