Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpusd1Q8VCZ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpusd1Q8VCZ8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.77■■□□□ 1.08
Rpusd1Q8VCZ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpusd1Q8VCZ8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rpusd1Q8VCZ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.75■■□□□ 1.07
Rpusd1Q8VCZ8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpusd1Q8VCZ8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rpusd1Q8VCZ8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rpusd1Q8VCZ8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpusd1Q8VCZ8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
Rpusd1Q8VCZ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rpusd1Q8VCZ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpusd1Q8VCZ8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpusd1Q8VCZ8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rpusd1Q8VCZ8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpusd1Q8VCZ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpusd1Q8VCZ8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpusd1Q8VCZ8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpusd1Q8VCZ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.71■■□□□ 1.07
Rpusd1Q8VCZ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.71■■□□□ 1.07
Rpusd1Q8VCZ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpusd1Q8VCZ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rpusd1Q8VCZ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rpusd1Q8VCZ8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpusd1Q8VCZ8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpusd1Q8VCZ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpusd1Q8VCZ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpusd1Q8VCZ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rpusd1Q8VCZ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpusd1Q8VCZ8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.68■■□□□ 1.06
Rpusd1Q8VCZ8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpusd1Q8VCZ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.66■■□□□ 1.06
Rpusd1Q8VCZ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.66■■□□□ 1.06
Rpusd1Q8VCZ8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rpusd1Q8VCZ8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpusd1Q8VCZ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpusd1Q8VCZ8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpusd1Q8VCZ8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Rpusd1Q8VCZ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rpusd1Q8VCZ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rpusd1Q8VCZ8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpusd1Q8VCZ8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpusd1Q8VCZ8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpusd1Q8VCZ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpusd1Q8VCZ8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rpusd1Q8VCZ8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpusd1Q8VCZ8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpusd1Q8VCZ8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpusd1Q8VCZ8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rpusd1Q8VCZ8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpusd1Q8VCZ8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpusd1Q8VCZ8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpusd1Q8VCZ8 Gm15546-201ENSMUST00000122095 826 ntBASIC21.61■■□□□ 1.05
Rpusd1Q8VCZ8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpusd1Q8VCZ8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpusd1Q8VCZ8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpusd1Q8VCZ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.6■■□□□ 1.05
Rpusd1Q8VCZ8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpusd1Q8VCZ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rpusd1Q8VCZ8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpusd1Q8VCZ8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpusd1Q8VCZ8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpusd1Q8VCZ8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpusd1Q8VCZ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.58■■□□□ 1.05
Rpusd1Q8VCZ8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rpusd1Q8VCZ8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rpusd1Q8VCZ8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 Gm43566-201ENSMUST00000196851 808 ntBASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.57■■□□□ 1.04
Rpusd1Q8VCZ8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpusd1Q8VCZ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpusd1Q8VCZ8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpusd1Q8VCZ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms