Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Gm45364-201ENSMUST00000210883 159 ntBASIC24.44■■□□□ 1.5
Sgms1Q8VCQ6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sgms1Q8VCQ6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.43■■□□□ 1.5
Sgms1Q8VCQ6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sgms1Q8VCQ6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
Sgms1Q8VCQ6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sgms1Q8VCQ6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sgms1Q8VCQ6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sgms1Q8VCQ6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.42■■□□□ 1.5
Sgms1Q8VCQ6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sgms1Q8VCQ6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Sgms1Q8VCQ6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sgms1Q8VCQ6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sgms1Q8VCQ6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.4■■□□□ 1.5
Sgms1Q8VCQ6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.4■■□□□ 1.5
Sgms1Q8VCQ6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sgms1Q8VCQ6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.39■■□□□ 1.49
Sgms1Q8VCQ6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sgms1Q8VCQ6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sgms1Q8VCQ6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sgms1Q8VCQ6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.38■■□□□ 1.49
Sgms1Q8VCQ6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sgms1Q8VCQ6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sgms1Q8VCQ6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.37■■□□□ 1.49
Sgms1Q8VCQ6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sgms1Q8VCQ6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sgms1Q8VCQ6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sgms1Q8VCQ6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sgms1Q8VCQ6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.35■■□□□ 1.49
Sgms1Q8VCQ6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.35■■□□□ 1.49
Sgms1Q8VCQ6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.34■■□□□ 1.49
Sgms1Q8VCQ6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sgms1Q8VCQ6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sgms1Q8VCQ6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sgms1Q8VCQ6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
Sgms1Q8VCQ6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sgms1Q8VCQ6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sgms1Q8VCQ6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sgms1Q8VCQ6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Sgms1Q8VCQ6 Terc-201ENSMUST00000082862 423 ntBASIC24.31■■□□□ 1.48
Sgms1Q8VCQ6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sgms1Q8VCQ6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.3■■□□□ 1.48
Sgms1Q8VCQ6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sgms1Q8VCQ6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sgms1Q8VCQ6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Sgms1Q8VCQ6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sgms1Q8VCQ6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sgms1Q8VCQ6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sgms1Q8VCQ6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sgms1Q8VCQ6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sgms1Q8VCQ6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sgms1Q8VCQ6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Sgms1Q8VCQ6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.25■■□□□ 1.47
Sgms1Q8VCQ6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sgms1Q8VCQ6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sgms1Q8VCQ6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sgms1Q8VCQ6 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms