Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ssx2ipQ8VC66 Mir3960-201ENSMUST00000198213 73 ntBASIC22.83■■□□□ 1.25
Ssx2ipQ8VC66 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.83■■□□□ 1.25
Ssx2ipQ8VC66 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ssx2ipQ8VC66 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.82■■□□□ 1.24
Ssx2ipQ8VC66 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Ssx2ipQ8VC66 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ssx2ipQ8VC66 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ssx2ipQ8VC66 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Ssx2ipQ8VC66 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Gm11175-201ENSMUST00000116172 543 ntBASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssx2ipQ8VC66 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Ssx2ipQ8VC66 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Ssx2ipQ8VC66 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ssx2ipQ8VC66 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Ssx2ipQ8VC66 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssx2ipQ8VC66 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssx2ipQ8VC66 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssx2ipQ8VC66 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
Ssx2ipQ8VC66 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.78■■□□□ 1.24
Ssx2ipQ8VC66 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.77■■□□□ 1.24
Ssx2ipQ8VC66 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ssx2ipQ8VC66 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ssx2ipQ8VC66 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ssx2ipQ8VC66 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ssx2ipQ8VC66 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ssx2ipQ8VC66 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ssx2ipQ8VC66 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.73■■□□□ 1.23
Ssx2ipQ8VC66 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
Ssx2ipQ8VC66 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ssx2ipQ8VC66 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ssx2ipQ8VC66 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 Gm6311-201ENSMUST00000073790 878 ntBASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.72■■□□□ 1.23
Ssx2ipQ8VC66 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Gm9812-201ENSMUST00000061934 968 ntBASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ssx2ipQ8VC66 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Ssx2ipQ8VC66 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.7■■□□□ 1.22
Ssx2ipQ8VC66 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ssx2ipQ8VC66 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ssx2ipQ8VC66 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ssx2ipQ8VC66 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.68■■□□□ 1.22
Ssx2ipQ8VC66 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ssx2ipQ8VC66 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ssx2ipQ8VC66 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ssx2ipQ8VC66 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ssx2ipQ8VC66 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Ssx2ipQ8VC66 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.67■■□□□ 1.22
Ssx2ipQ8VC66 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssx2ipQ8VC66 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ssx2ipQ8VC66 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ssx2ipQ8VC66 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssx2ipQ8VC66 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Ssx2ipQ8VC66 Gm45364-201ENSMUST00000210883 159 ntBASIC22.65■■□□□ 1.22
Ssx2ipQ8VC66 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.65■■□□□ 1.22
Ssx2ipQ8VC66 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssx2ipQ8VC66 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssx2ipQ8VC66 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Ssx2ipQ8VC66 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ssx2ipQ8VC66 Mir6538-201ENSMUST00000183713 110 ntBASIC22.64■■□□□ 1.21
Ssx2ipQ8VC66 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ssx2ipQ8VC66 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ssx2ipQ8VC66 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms