Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.46■■□□□ 1.03
Rnf8Q8VC56 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf8Q8VC56 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf8Q8VC56 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf8Q8VC56 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf8Q8VC56 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf8Q8VC56 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf8Q8VC56 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rnf8Q8VC56 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf8Q8VC56 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf8Q8VC56 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rnf8Q8VC56 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf8Q8VC56 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf8Q8VC56 Gm37136-201ENSMUST00000194368 194 ntBASIC21.4■■□□□ 1.02
Rnf8Q8VC56 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf8Q8VC56 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.4■■□□□ 1.02
Rnf8Q8VC56 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.02
Rnf8Q8VC56 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Rnf8Q8VC56 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf8Q8VC56 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.39■■□□□ 1.01
Rnf8Q8VC56 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf8Q8VC56 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rnf8Q8VC56 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf8Q8VC56 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf8Q8VC56 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.36■■□□□ 1.01
Rnf8Q8VC56 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf8Q8VC56 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rnf8Q8VC56 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf8Q8VC56 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf8Q8VC56 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf8Q8VC56 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf8Q8VC56 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf8Q8VC56 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf8Q8VC56 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.33■■□□□ 1.01
Rnf8Q8VC56 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf8Q8VC56 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.33■■□□□ 1
Rnf8Q8VC56 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf8Q8VC56 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.32■■□□□ 1
Rnf8Q8VC56 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf8Q8VC56 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf8Q8VC56 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf8Q8VC56 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf8Q8VC56 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf8Q8VC56 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf8Q8VC56 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rnf8Q8VC56 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf8Q8VC56 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf8Q8VC56 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.3■■□□□ 1
Rnf8Q8VC56 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf8Q8VC56 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms