Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Chrna3Q8R4G9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Chrna3Q8R4G9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrna3Q8R4G9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Chrna3Q8R4G9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chrna3Q8R4G9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chrna3Q8R4G9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.08■■□□□ 1.13
Chrna3Q8R4G9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chrna3Q8R4G9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chrna3Q8R4G9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Gm14523-201ENSMUST00000117260 558 ntBASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chrna3Q8R4G9 Gm44428-201ENSMUST00000204474 874 ntBASIC22.05■■□□□ 1.12
Chrna3Q8R4G9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chrna3Q8R4G9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Chrna3Q8R4G9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Chrna3Q8R4G9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chrna3Q8R4G9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chrna3Q8R4G9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Chrna3Q8R4G9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.03■■□□□ 1.12
Chrna3Q8R4G9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chrna3Q8R4G9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Gm7332-201ENSMUST00000118351 454 ntBASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Chrna3Q8R4G9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Chrna3Q8R4G9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chrna3Q8R4G9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chrna3Q8R4G9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.01■■□□□ 1.11
Chrna3Q8R4G9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Chrna3Q8R4G9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chrna3Q8R4G9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22■■□□□ 1.11
Chrna3Q8R4G9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chrna3Q8R4G9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chrna3Q8R4G9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
Chrna3Q8R4G9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chrna3Q8R4G9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chrna3Q8R4G9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chrna3Q8R4G9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chrna3Q8R4G9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Chrna3Q8R4G9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chrna3Q8R4G9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.98■■□□□ 1.11
Chrna3Q8R4G9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chrna3Q8R4G9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chrna3Q8R4G9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.97■■□□□ 1.11
Chrna3Q8R4G9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Chrna3Q8R4G9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chrna3Q8R4G9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chrna3Q8R4G9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Chrna3Q8R4G9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.96■■□□□ 1.11
Chrna3Q8R4G9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chrna3Q8R4G9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chrna3Q8R4G9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chrna3Q8R4G9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.95■■□□□ 1.1
Chrna3Q8R4G9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.95■■□□□ 1.1
Chrna3Q8R4G9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chrna3Q8R4G9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.94■■□□□ 1.1
Chrna3Q8R4G9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chrna3Q8R4G9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chrna3Q8R4G9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chrna3Q8R4G9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chrna3Q8R4G9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chrna3Q8R4G9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Chrna3Q8R4G9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.91■■□□□ 1.1
Chrna3Q8R4G9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms