Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cuedc1Q8R3V6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cuedc1Q8R3V6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cuedc1Q8R3V6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cuedc1Q8R3V6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cuedc1Q8R3V6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cuedc1Q8R3V6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cuedc1Q8R3V6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cuedc1Q8R3V6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cuedc1Q8R3V6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cuedc1Q8R3V6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cuedc1Q8R3V6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Cuedc1Q8R3V6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cuedc1Q8R3V6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cuedc1Q8R3V6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cuedc1Q8R3V6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cuedc1Q8R3V6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cuedc1Q8R3V6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.13■□□□□ 0.81
Cuedc1Q8R3V6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cuedc1Q8R3V6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cuedc1Q8R3V6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cuedc1Q8R3V6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cuedc1Q8R3V6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cuedc1Q8R3V6 Terc-201ENSMUST00000082862 423 ntBASIC20.11■□□□□ 0.81
Cuedc1Q8R3V6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cuedc1Q8R3V6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cuedc1Q8R3V6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cuedc1Q8R3V6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cuedc1Q8R3V6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.09■□□□□ 0.81
Cuedc1Q8R3V6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cuedc1Q8R3V6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cuedc1Q8R3V6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cuedc1Q8R3V6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cuedc1Q8R3V6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cuedc1Q8R3V6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cuedc1Q8R3V6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cuedc1Q8R3V6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cuedc1Q8R3V6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Rps24-207ENSMUST00000224568 714 ntBASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cuedc1Q8R3V6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cuedc1Q8R3V6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cuedc1Q8R3V6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cuedc1Q8R3V6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.04■□□□□ 0.8
Cuedc1Q8R3V6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.04■□□□□ 0.8
Cuedc1Q8R3V6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cuedc1Q8R3V6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cuedc1Q8R3V6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cuedc1Q8R3V6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cuedc1Q8R3V6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms