Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afjQ8R1M2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H2afjQ8R1M2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afjQ8R1M2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afjQ8R1M2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.78■□□□□ 0.92
H2afjQ8R1M2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afjQ8R1M2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afjQ8R1M2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
H2afjQ8R1M2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afjQ8R1M2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H2afjQ8R1M2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
H2afjQ8R1M2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afjQ8R1M2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afjQ8R1M2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
H2afjQ8R1M2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afjQ8R1M2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afjQ8R1M2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afjQ8R1M2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afjQ8R1M2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
H2afjQ8R1M2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H2afjQ8R1M2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afjQ8R1M2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2afjQ8R1M2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afjQ8R1M2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afjQ8R1M2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H2afjQ8R1M2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afjQ8R1M2 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.72■□□□□ 0.91
H2afjQ8R1M2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
H2afjQ8R1M2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
H2afjQ8R1M2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afjQ8R1M2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
H2afjQ8R1M2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afjQ8R1M2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afjQ8R1M2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afjQ8R1M2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afjQ8R1M2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afjQ8R1M2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afjQ8R1M2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afjQ8R1M2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.69■□□□□ 0.9
H2afjQ8R1M2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afjQ8R1M2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afjQ8R1M2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
H2afjQ8R1M2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afjQ8R1M2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afjQ8R1M2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
H2afjQ8R1M2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
H2afjQ8R1M2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H2afjQ8R1M2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H2afjQ8R1M2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
H2afjQ8R1M2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afjQ8R1M2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.66■□□□□ 0.9
H2afjQ8R1M2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
H2afjQ8R1M2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
H2afjQ8R1M2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afjQ8R1M2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
H2afjQ8R1M2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afjQ8R1M2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afjQ8R1M2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afjQ8R1M2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afjQ8R1M2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.64■□□□□ 0.89
H2afjQ8R1M2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afjQ8R1M2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afjQ8R1M2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afjQ8R1M2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.62■□□□□ 0.89
H2afjQ8R1M2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.62■□□□□ 0.89
H2afjQ8R1M2 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.61■□□□□ 0.89
H2afjQ8R1M2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afjQ8R1M2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afjQ8R1M2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms