Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Gm14523-201ENSMUST00000117260 558 ntBASIC24.25■■□□□ 1.47
Rpp40Q8R1F9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rpp40Q8R1F9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Gm44428-201ENSMUST00000204474 874 ntBASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Gm7332-201ENSMUST00000118351 454 ntBASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpp40Q8R1F9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpp40Q8R1F9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms