Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.54■■■□□ 2
Sf3a1Q8K4Z5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Sf3a1Q8K4Z5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Sf3a1Q8K4Z5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Sf3a1Q8K4Z5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Sf3a1Q8K4Z5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Sf3a1Q8K4Z5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Sf3a1Q8K4Z5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Sf3a1Q8K4Z5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Sf3a1Q8K4Z5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Sf3a1Q8K4Z5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
Sf3a1Q8K4Z5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.51■■■□□ 2
Sf3a1Q8K4Z5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Sf3a1Q8K4Z5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.51■■□□□ 1.99
Sf3a1Q8K4Z5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sf3a1Q8K4Z5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.51■■□□□ 1.99
Sf3a1Q8K4Z5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Sf3a1Q8K4Z5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Sf3a1Q8K4Z5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Sf3a1Q8K4Z5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Sf3a1Q8K4Z5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Sf3a1Q8K4Z5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.49■■□□□ 1.99
Sf3a1Q8K4Z5 Mir6538-201ENSMUST00000183713 110 ntBASIC27.49■■□□□ 1.99
Sf3a1Q8K4Z5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sf3a1Q8K4Z5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sf3a1Q8K4Z5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sf3a1Q8K4Z5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sf3a1Q8K4Z5 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.47■■□□□ 1.99
Sf3a1Q8K4Z5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.47■■□□□ 1.99
Sf3a1Q8K4Z5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Sf3a1Q8K4Z5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Sf3a1Q8K4Z5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
Sf3a1Q8K4Z5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Sf3a1Q8K4Z5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Sf3a1Q8K4Z5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Sf3a1Q8K4Z5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sf3a1Q8K4Z5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sf3a1Q8K4Z5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sf3a1Q8K4Z5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Sf3a1Q8K4Z5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sf3a1Q8K4Z5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Sf3a1Q8K4Z5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Sf3a1Q8K4Z5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sf3a1Q8K4Z5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sf3a1Q8K4Z5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sf3a1Q8K4Z5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sf3a1Q8K4Z5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.41■■□□□ 1.98
Sf3a1Q8K4Z5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Sf3a1Q8K4Z5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.4■■□□□ 1.98
Sf3a1Q8K4Z5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.4■■□□□ 1.98
Sf3a1Q8K4Z5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Sf3a1Q8K4Z5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sf3a1Q8K4Z5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sf3a1Q8K4Z5 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.38■■□□□ 1.97
Sf3a1Q8K4Z5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.38■■□□□ 1.97
Sf3a1Q8K4Z5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Sf3a1Q8K4Z5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sf3a1Q8K4Z5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Sf3a1Q8K4Z5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Sf3a1Q8K4Z5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Sf3a1Q8K4Z5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Sf3a1Q8K4Z5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Sf3a1Q8K4Z5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Sf3a1Q8K4Z5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sf3a1Q8K4Z5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sf3a1Q8K4Z5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sf3a1Q8K4Z5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Sf3a1Q8K4Z5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.32■■□□□ 1.96
Sf3a1Q8K4Z5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Sf3a1Q8K4Z5 Gm44428-201ENSMUST00000204474 874 ntBASIC27.31■■□□□ 1.96
Sf3a1Q8K4Z5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Sf3a1Q8K4Z5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Sf3a1Q8K4Z5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.3■■□□□ 1.96
Sf3a1Q8K4Z5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Sf3a1Q8K4Z5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Sf3a1Q8K4Z5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Sf3a1Q8K4Z5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Sf3a1Q8K4Z5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.29■■□□□ 1.96
Sf3a1Q8K4Z5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.29■■□□□ 1.96
Sf3a1Q8K4Z5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Sf3a1Q8K4Z5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Sf3a1Q8K4Z5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Sf3a1Q8K4Z5 Gm27502-201ENSMUST00000183495 199 ntBASIC27.28■■□□□ 1.96
Sf3a1Q8K4Z5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.27■■□□□ 1.96
Sf3a1Q8K4Z5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Sf3a1Q8K4Z5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Sf3a1Q8K4Z5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Sf3a1Q8K4Z5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms