Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lin28aQ8K3Y3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lin28aQ8K3Y3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lin28aQ8K3Y3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lin28aQ8K3Y3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lin28aQ8K3Y3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lin28aQ8K3Y3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lin28aQ8K3Y3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Lin28aQ8K3Y3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lin28aQ8K3Y3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lin28aQ8K3Y3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.02■□□□□ 0.96
Lin28aQ8K3Y3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lin28aQ8K3Y3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lin28aQ8K3Y3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lin28aQ8K3Y3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21■□□□□ 0.95
Lin28aQ8K3Y3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lin28aQ8K3Y3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.99■□□□□ 0.95
Lin28aQ8K3Y3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lin28aQ8K3Y3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lin28aQ8K3Y3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lin28aQ8K3Y3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lin28aQ8K3Y3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.98■□□□□ 0.95
Lin28aQ8K3Y3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lin28aQ8K3Y3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Lin28aQ8K3Y3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lin28aQ8K3Y3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lin28aQ8K3Y3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lin28aQ8K3Y3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lin28aQ8K3Y3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lin28aQ8K3Y3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lin28aQ8K3Y3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.94■□□□□ 0.94
Lin28aQ8K3Y3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.94■□□□□ 0.94
Lin28aQ8K3Y3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.94■□□□□ 0.94
Lin28aQ8K3Y3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lin28aQ8K3Y3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lin28aQ8K3Y3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lin28aQ8K3Y3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lin28aQ8K3Y3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lin28aQ8K3Y3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.92■□□□□ 0.94
Lin28aQ8K3Y3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin28aQ8K3Y3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin28aQ8K3Y3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin28aQ8K3Y3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin28aQ8K3Y3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lin28aQ8K3Y3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lin28aQ8K3Y3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lin28aQ8K3Y3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lin28aQ8K3Y3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lin28aQ8K3Y3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lin28aQ8K3Y3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Lin28aQ8K3Y3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lin28aQ8K3Y3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lin28aQ8K3Y3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lin28aQ8K3Y3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lin28aQ8K3Y3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lin28aQ8K3Y3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lin28aQ8K3Y3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lin28aQ8K3Y3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lin28aQ8K3Y3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.86■□□□□ 0.93
Lin28aQ8K3Y3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lin28aQ8K3Y3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lin28aQ8K3Y3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms