Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfwd3Q8CIK8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfwd3Q8CIK8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfwd3Q8CIK8 Scarna2-201ENSMUST00000157560 414 ntBASIC21.02■□□□□ 0.96
Rfwd3Q8CIK8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfwd3Q8CIK8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Rfwd3Q8CIK8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Gm9806-201ENSMUST00000051080 552 ntBASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfwd3Q8CIK8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfwd3Q8CIK8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfwd3Q8CIK8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Rfwd3Q8CIK8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfwd3Q8CIK8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.99■□□□□ 0.95
Rfwd3Q8CIK8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfwd3Q8CIK8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rfwd3Q8CIK8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfwd3Q8CIK8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.98■□□□□ 0.95
Rfwd3Q8CIK8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfwd3Q8CIK8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfwd3Q8CIK8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rfwd3Q8CIK8 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Rfwd3Q8CIK8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd3Q8CIK8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd3Q8CIK8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd3Q8CIK8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfwd3Q8CIK8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfwd3Q8CIK8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Gm16437-201ENSMUST00000025669 507 ntBASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.95■□□□□ 0.94
Rfwd3Q8CIK8 Gm11687-201ENSMUST00000118911 886 ntBASIC20.94■□□□□ 0.94
Rfwd3Q8CIK8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd3Q8CIK8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.94■□□□□ 0.94
Rfwd3Q8CIK8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd3Q8CIK8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfwd3Q8CIK8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfwd3Q8CIK8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfwd3Q8CIK8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.91■□□□□ 0.94
Rfwd3Q8CIK8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfwd3Q8CIK8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.91■□□□□ 0.94
Rfwd3Q8CIK8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rfwd3Q8CIK8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rfwd3Q8CIK8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfwd3Q8CIK8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.9■□□□□ 0.94
Rfwd3Q8CIK8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rfwd3Q8CIK8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfwd3Q8CIK8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Rfwd3Q8CIK8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.89■□□□□ 0.93
Rfwd3Q8CIK8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rfwd3Q8CIK8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd3Q8CIK8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd3Q8CIK8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfwd3Q8CIK8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfwd3Q8CIK8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfwd3Q8CIK8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfwd3Q8CIK8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Rfwd3Q8CIK8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms