Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp28Q8CGV8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp28Q8CGV8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp28Q8CGV8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp28Q8CGV8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp28Q8CGV8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.11■□□□□ 0.65
Mmp28Q8CGV8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp28Q8CGV8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp28Q8CGV8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Mmp28Q8CGV8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp28Q8CGV8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp28Q8CGV8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Mmp28Q8CGV8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp28Q8CGV8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.09■□□□□ 0.65
Mmp28Q8CGV8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp28Q8CGV8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp28Q8CGV8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp28Q8CGV8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Gm24970-201ENSMUST00000175582 82 ntBASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Gm45855-201ENSMUST00000212546 880 ntBASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp28Q8CGV8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp28Q8CGV8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp28Q8CGV8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
Mmp28Q8CGV8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Mmp28Q8CGV8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp28Q8CGV8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp28Q8CGV8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp28Q8CGV8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.05■□□□□ 0.64
Mmp28Q8CGV8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp28Q8CGV8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp28Q8CGV8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp28Q8CGV8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Mmp28Q8CGV8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp28Q8CGV8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.04■□□□□ 0.64
Mmp28Q8CGV8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp28Q8CGV8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Mmp28Q8CGV8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp28Q8CGV8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp28Q8CGV8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp28Q8CGV8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.01■□□□□ 0.63
Mmp28Q8CGV8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp28Q8CGV8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp28Q8CGV8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp28Q8CGV8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp28Q8CGV8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp28Q8CGV8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp28Q8CGV8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp28Q8CGV8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Mmp28Q8CGV8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp28Q8CGV8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp28Q8CGV8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Mmp28Q8CGV8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp28Q8CGV8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp28Q8CGV8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp28Q8CGV8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp28Q8CGV8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp28Q8CGV8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp28Q8CGV8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp28Q8CGV8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp28Q8CGV8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp28Q8CGV8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Mmp28Q8CGV8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms