Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Brf1Q8CFK2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Brf1Q8CFK2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Brf1Q8CFK2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.26■■□□□ 1.95
Brf1Q8CFK2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Brf1Q8CFK2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Brf1Q8CFK2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
Brf1Q8CFK2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Brf1Q8CFK2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.25■■□□□ 1.95
Brf1Q8CFK2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.24■■□□□ 1.95
Brf1Q8CFK2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Brf1Q8CFK2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Brf1Q8CFK2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Brf1Q8CFK2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Gm16437-201ENSMUST00000025669 507 ntBASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Gm9806-201ENSMUST00000051080 552 ntBASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Brf1Q8CFK2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC27.22■■□□□ 1.95
Brf1Q8CFK2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Brf1Q8CFK2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Brf1Q8CFK2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Brf1Q8CFK2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Brf1Q8CFK2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Brf1Q8CFK2 Gm11175-201ENSMUST00000116172 543 ntBASIC27.2■■□□□ 1.94
Brf1Q8CFK2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.2■■□□□ 1.94
Brf1Q8CFK2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Brf1Q8CFK2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Brf1Q8CFK2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.2■■□□□ 1.94
Brf1Q8CFK2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Brf1Q8CFK2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Brf1Q8CFK2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Brf1Q8CFK2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Brf1Q8CFK2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.18■■□□□ 1.94
Brf1Q8CFK2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Brf1Q8CFK2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Brf1Q8CFK2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Brf1Q8CFK2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Brf1Q8CFK2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Brf1Q8CFK2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Brf1Q8CFK2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.16■■□□□ 1.94
Brf1Q8CFK2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Brf1Q8CFK2 Il17rd-202ENSMUST00000223942 2186 ntBASIC27.15■■□□□ 1.94
Brf1Q8CFK2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Brf1Q8CFK2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Gm11687-201ENSMUST00000118911 886 ntBASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Brf1Q8CFK2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Brf1Q8CFK2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.13■■□□□ 1.93
Brf1Q8CFK2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Brf1Q8CFK2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Brf1Q8CFK2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Brf1Q8CFK2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Brf1Q8CFK2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Brf1Q8CFK2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Brf1Q8CFK2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Brf1Q8CFK2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Brf1Q8CFK2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Brf1Q8CFK2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Brf1Q8CFK2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Brf1Q8CFK2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Brf1Q8CFK2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Brf1Q8CFK2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Brf1Q8CFK2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Brf1Q8CFK2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Brf1Q8CFK2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Brf1Q8CFK2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Brf1Q8CFK2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Brf1Q8CFK2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.07■■□□□ 1.92
Brf1Q8CFK2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Brf1Q8CFK2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.06■■□□□ 1.92
Brf1Q8CFK2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.06■■□□□ 1.92
Brf1Q8CFK2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms