Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.69■■□□□ 1.06
Slc46a2Q8CA03 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Slc46a2Q8CA03 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc46a2Q8CA03 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc46a2Q8CA03 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc46a2Q8CA03 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Slc46a2Q8CA03 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc46a2Q8CA03 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc46a2Q8CA03 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.67■■□□□ 1.06
Slc46a2Q8CA03 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc46a2Q8CA03 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc46a2Q8CA03 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc46a2Q8CA03 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc46a2Q8CA03 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc46a2Q8CA03 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc46a2Q8CA03 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc46a2Q8CA03 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc46a2Q8CA03 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slc46a2Q8CA03 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc46a2Q8CA03 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc46a2Q8CA03 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc46a2Q8CA03 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc46a2Q8CA03 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc46a2Q8CA03 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.61■■□□□ 1.05
Slc46a2Q8CA03 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc46a2Q8CA03 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Slc46a2Q8CA03 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Slc46a2Q8CA03 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.59■■□□□ 1.05
Slc46a2Q8CA03 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc46a2Q8CA03 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc46a2Q8CA03 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc46a2Q8CA03 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc46a2Q8CA03 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc46a2Q8CA03 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc46a2Q8CA03 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.57■■□□□ 1.04
Slc46a2Q8CA03 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc46a2Q8CA03 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
Slc46a2Q8CA03 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc46a2Q8CA03 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc46a2Q8CA03 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc46a2Q8CA03 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc46a2Q8CA03 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.53■■□□□ 1.04
Slc46a2Q8CA03 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc46a2Q8CA03 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc46a2Q8CA03 Gm37136-201ENSMUST00000194368 194 ntBASIC21.53■■□□□ 1.04
Slc46a2Q8CA03 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slc46a2Q8CA03 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc46a2Q8CA03 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.52■■□□□ 1.04
Slc46a2Q8CA03 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc46a2Q8CA03 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc46a2Q8CA03 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc46a2Q8CA03 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Slc46a2Q8CA03 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc46a2Q8CA03 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc46a2Q8CA03 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc46a2Q8CA03 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc46a2Q8CA03 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc46a2Q8CA03 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc46a2Q8CA03 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Slc46a2Q8CA03 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc46a2Q8CA03 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc46a2Q8CA03 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc46a2Q8CA03 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc46a2Q8CA03 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms