Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Usp44Q8C2S0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.67■■□□□ 1.86
Usp44Q8C2S0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.66■■□□□ 1.86
Usp44Q8C2S0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.66■■□□□ 1.86
Usp44Q8C2S0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Usp44Q8C2S0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp44Q8C2S0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp44Q8C2S0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Usp44Q8C2S0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp44Q8C2S0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.86
Usp44Q8C2S0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp44Q8C2S0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Usp44Q8C2S0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.64■■□□□ 1.86
Usp44Q8C2S0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Usp44Q8C2S0 Scarna2-201ENSMUST00000157560 414 ntBASIC26.63■■□□□ 1.85
Usp44Q8C2S0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp44Q8C2S0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp44Q8C2S0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
Usp44Q8C2S0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp44Q8C2S0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp44Q8C2S0 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.61■■□□□ 1.85
Usp44Q8C2S0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp44Q8C2S0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp44Q8C2S0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp44Q8C2S0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp44Q8C2S0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp44Q8C2S0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp44Q8C2S0 Gm11175-201ENSMUST00000116172 543 ntBASIC26.58■■□□□ 1.85
Usp44Q8C2S0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.58■■□□□ 1.85
Usp44Q8C2S0 Gm9806-201ENSMUST00000051080 552 ntBASIC26.58■■□□□ 1.85
Usp44Q8C2S0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp44Q8C2S0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp44Q8C2S0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp44Q8C2S0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.57■■□□□ 1.84
Usp44Q8C2S0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp44Q8C2S0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Usp44Q8C2S0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Gm16437-201ENSMUST00000025669 507 ntBASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp44Q8C2S0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp44Q8C2S0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.54■■□□□ 1.84
Usp44Q8C2S0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp44Q8C2S0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.54■■□□□ 1.84
Usp44Q8C2S0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp44Q8C2S0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp44Q8C2S0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Usp44Q8C2S0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp44Q8C2S0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Usp44Q8C2S0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp44Q8C2S0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp44Q8C2S0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp44Q8C2S0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp44Q8C2S0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp44Q8C2S0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp44Q8C2S0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp44Q8C2S0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.5■■□□□ 1.83
Usp44Q8C2S0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp44Q8C2S0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Usp44Q8C2S0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Usp44Q8C2S0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp44Q8C2S0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.48■■□□□ 1.83
Usp44Q8C2S0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp44Q8C2S0 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.48■■□□□ 1.83
Usp44Q8C2S0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Usp44Q8C2S0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.48■■□□□ 1.83
Usp44Q8C2S0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.47■■□□□ 1.83
Usp44Q8C2S0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp44Q8C2S0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp44Q8C2S0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp44Q8C2S0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Usp44Q8C2S0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Usp44Q8C2S0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Usp44Q8C2S0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Usp44Q8C2S0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
Usp44Q8C2S0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Usp44Q8C2S0 Gm11687-201ENSMUST00000118911 886 ntBASIC26.45■■□□□ 1.82
Usp44Q8C2S0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp44Q8C2S0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.45■■□□□ 1.82
Usp44Q8C2S0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp44Q8C2S0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.44■■□□□ 1.82
Usp44Q8C2S0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms