Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lrtm1Q8BXQ3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Gm11687-201ENSMUST00000118911 886 ntBASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lrtm1Q8BXQ3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.65■□□□□ 0.74
Lrtm1Q8BXQ3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lrtm1Q8BXQ3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrtm1Q8BXQ3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrtm1Q8BXQ3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.64■□□□□ 0.73
Lrtm1Q8BXQ3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrtm1Q8BXQ3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lrtm1Q8BXQ3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrtm1Q8BXQ3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrtm1Q8BXQ3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrtm1Q8BXQ3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrtm1Q8BXQ3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Lrtm1Q8BXQ3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrtm1Q8BXQ3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrtm1Q8BXQ3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrtm1Q8BXQ3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrtm1Q8BXQ3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrtm1Q8BXQ3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrtm1Q8BXQ3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrtm1Q8BXQ3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Mir6538-201ENSMUST00000183713 110 ntBASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrtm1Q8BXQ3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.59■□□□□ 0.73
Lrtm1Q8BXQ3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrtm1Q8BXQ3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrtm1Q8BXQ3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lrtm1Q8BXQ3 Gm27502-201ENSMUST00000183495 199 ntBASIC19.58■□□□□ 0.72
Lrtm1Q8BXQ3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrtm1Q8BXQ3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrtm1Q8BXQ3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lrtm1Q8BXQ3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrtm1Q8BXQ3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.57■□□□□ 0.72
Lrtm1Q8BXQ3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrtm1Q8BXQ3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lrtm1Q8BXQ3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lrtm1Q8BXQ3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrtm1Q8BXQ3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrtm1Q8BXQ3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrtm1Q8BXQ3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrtm1Q8BXQ3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lrtm1Q8BXQ3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.53■□□□□ 0.72
Lrtm1Q8BXQ3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrtm1Q8BXQ3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.53■□□□□ 0.72
Lrtm1Q8BXQ3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrtm1Q8BXQ3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms