Protein–RNA interactions for Protein: Q8BX70

Vps13c, Vacuolar protein sorting-associated protein 13C, mousemouse

Predictions only

Length 3,748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13cQ8BX70 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps13cQ8BX70 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13cQ8BX70 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13cQ8BX70 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
Vps13cQ8BX70 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.63■□□□□ 0.89
Vps13cQ8BX70 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13cQ8BX70 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13cQ8BX70 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13cQ8BX70 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13cQ8BX70 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Vps13cQ8BX70 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13cQ8BX70 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13cQ8BX70 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13cQ8BX70 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vps13cQ8BX70 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13cQ8BX70 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13cQ8BX70 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13cQ8BX70 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vps13cQ8BX70 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13cQ8BX70 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13cQ8BX70 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13cQ8BX70 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.58■□□□□ 0.89
Vps13cQ8BX70 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.58■□□□□ 0.89
Vps13cQ8BX70 Gm9959-201ENSMUST00000068277 390 ntBASIC20.57■□□□□ 0.88
Vps13cQ8BX70 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13cQ8BX70 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13cQ8BX70 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
Vps13cQ8BX70 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Vps13cQ8BX70 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.56■□□□□ 0.88
Vps13cQ8BX70 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Vps13cQ8BX70 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13cQ8BX70 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps13cQ8BX70 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13cQ8BX70 Gm45444-201ENSMUST00000211394 898 ntBASIC20.54■□□□□ 0.88
Vps13cQ8BX70 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13cQ8BX70 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.53■□□□□ 0.88
Vps13cQ8BX70 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13cQ8BX70 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Vps13cQ8BX70 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13cQ8BX70 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13cQ8BX70 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Vps13cQ8BX70 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps13cQ8BX70 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Vps13cQ8BX70 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.5■□□□□ 0.87
Vps13cQ8BX70 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13cQ8BX70 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13cQ8BX70 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13cQ8BX70 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.49■□□□□ 0.87
Vps13cQ8BX70 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13cQ8BX70 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Vps13cQ8BX70 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Vps13cQ8BX70 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps13cQ8BX70 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.48■□□□□ 0.87
Vps13cQ8BX70 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.48■□□□□ 0.87
Vps13cQ8BX70 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13cQ8BX70 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13cQ8BX70 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.47■□□□□ 0.87
Vps13cQ8BX70 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.47■□□□□ 0.87
Vps13cQ8BX70 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13cQ8BX70 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vps13cQ8BX70 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13cQ8BX70 Gm44428-201ENSMUST00000204474 874 ntBASIC20.45■□□□□ 0.87
Vps13cQ8BX70 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps13cQ8BX70 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vps13cQ8BX70 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.44■□□□□ 0.86
Vps13cQ8BX70 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13cQ8BX70 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13cQ8BX70 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.44■□□□□ 0.86
Vps13cQ8BX70 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Vps13cQ8BX70 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13cQ8BX70 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13cQ8BX70 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13cQ8BX70 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13cQ8BX70 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.42■□□□□ 0.86
Vps13cQ8BX70 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms