Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc5a7Q8BGY9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc5a7Q8BGY9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc5a7Q8BGY9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc5a7Q8BGY9 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.78■□□□□ 0.76
Slc5a7Q8BGY9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Slc5a7Q8BGY9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc5a7Q8BGY9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc5a7Q8BGY9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc5a7Q8BGY9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Slc5a7Q8BGY9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc5a7Q8BGY9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc5a7Q8BGY9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Slc5a7Q8BGY9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc5a7Q8BGY9 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.75■□□□□ 0.75
Slc5a7Q8BGY9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Slc5a7Q8BGY9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc5a7Q8BGY9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc5a7Q8BGY9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc5a7Q8BGY9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc5a7Q8BGY9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc5a7Q8BGY9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc5a7Q8BGY9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Slc5a7Q8BGY9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.73■□□□□ 0.75
Slc5a7Q8BGY9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.72■□□□□ 0.75
Slc5a7Q8BGY9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc5a7Q8BGY9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc5a7Q8BGY9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc5a7Q8BGY9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc5a7Q8BGY9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Slc5a7Q8BGY9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc5a7Q8BGY9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slc5a7Q8BGY9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc5a7Q8BGY9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc5a7Q8BGY9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc5a7Q8BGY9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc5a7Q8BGY9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc5a7Q8BGY9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc5a7Q8BGY9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc5a7Q8BGY9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc5a7Q8BGY9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc5a7Q8BGY9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slc5a7Q8BGY9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.65■□□□□ 0.74
Slc5a7Q8BGY9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc5a7Q8BGY9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc5a7Q8BGY9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc5a7Q8BGY9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.63■□□□□ 0.73
Slc5a7Q8BGY9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slc5a7Q8BGY9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.63■□□□□ 0.73
Slc5a7Q8BGY9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc5a7Q8BGY9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc5a7Q8BGY9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc5a7Q8BGY9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc5a7Q8BGY9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc5a7Q8BGY9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc5a7Q8BGY9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc5a7Q8BGY9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc5a7Q8BGY9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc5a7Q8BGY9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc5a7Q8BGY9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms