Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim23Q8BGX0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim23Q8BGX0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim23Q8BGX0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim23Q8BGX0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.76■■□□□ 1.07
Trim23Q8BGX0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim23Q8BGX0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim23Q8BGX0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim23Q8BGX0 Gm44428-201ENSMUST00000204474 874 ntBASIC21.74■■□□□ 1.07
Trim23Q8BGX0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim23Q8BGX0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim23Q8BGX0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim23Q8BGX0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim23Q8BGX0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim23Q8BGX0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.71■■□□□ 1.07
Trim23Q8BGX0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim23Q8BGX0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim23Q8BGX0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.7■■□□□ 1.06
Trim23Q8BGX0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim23Q8BGX0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim23Q8BGX0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.69■■□□□ 1.06
Trim23Q8BGX0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim23Q8BGX0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim23Q8BGX0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim23Q8BGX0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim23Q8BGX0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim23Q8BGX0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim23Q8BGX0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim23Q8BGX0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim23Q8BGX0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim23Q8BGX0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.66■■□□□ 1.06
Trim23Q8BGX0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim23Q8BGX0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.65■■□□□ 1.06
Trim23Q8BGX0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim23Q8BGX0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim23Q8BGX0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim23Q8BGX0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim23Q8BGX0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trim23Q8BGX0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim23Q8BGX0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim23Q8BGX0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.62■■□□□ 1.05
Trim23Q8BGX0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim23Q8BGX0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim23Q8BGX0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim23Q8BGX0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms