Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx42Q810A7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ddx42Q810A7 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.57■■□□□ 1.2
Ddx42Q810A7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx42Q810A7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx42Q810A7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx42Q810A7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx42Q810A7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx42Q810A7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx42Q810A7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
Ddx42Q810A7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.54■■□□□ 1.2
Ddx42Q810A7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx42Q810A7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx42Q810A7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx42Q810A7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.53■■□□□ 1.2
Ddx42Q810A7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ddx42Q810A7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx42Q810A7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.52■■□□□ 1.2
Ddx42Q810A7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ddx42Q810A7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx42Q810A7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx42Q810A7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx42Q810A7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx42Q810A7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx42Q810A7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx42Q810A7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx42Q810A7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ddx42Q810A7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.49■■□□□ 1.19
Ddx42Q810A7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx42Q810A7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ddx42Q810A7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.49■■□□□ 1.19
Ddx42Q810A7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx42Q810A7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx42Q810A7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx42Q810A7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.48■■□□□ 1.19
Ddx42Q810A7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.48■■□□□ 1.19
Ddx42Q810A7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx42Q810A7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ddx42Q810A7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx42Q810A7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx42Q810A7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx42Q810A7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx42Q810A7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx42Q810A7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx42Q810A7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx42Q810A7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx42Q810A7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ddx42Q810A7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx42Q810A7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ddx42Q810A7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx42Q810A7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx42Q810A7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.45■■□□□ 1.18
Ddx42Q810A7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx42Q810A7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx42Q810A7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Ddx42Q810A7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx42Q810A7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Ddx42Q810A7 Gm30023-201ENSMUST00000197970 889 ntBASIC22.42■■□□□ 1.18
Ddx42Q810A7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ddx42Q810A7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx42Q810A7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx42Q810A7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Ddx42Q810A7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ddx42Q810A7 Mir6538-201ENSMUST00000183713 110 ntBASIC22.41■■□□□ 1.18
Ddx42Q810A7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx42Q810A7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx42Q810A7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx42Q810A7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx42Q810A7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.4■■□□□ 1.18
Ddx42Q810A7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx42Q810A7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms