Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trnp1Q80ZI1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Trnp1Q80ZI1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnp1Q80ZI1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.15■■□□□ 1.78
Trnp1Q80ZI1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.14■■□□□ 1.78
Trnp1Q80ZI1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.77
Trnp1Q80ZI1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trnp1Q80ZI1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.13■■□□□ 1.77
Trnp1Q80ZI1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.13■■□□□ 1.77
Trnp1Q80ZI1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trnp1Q80ZI1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Trnp1Q80ZI1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.11■■□□□ 1.77
Trnp1Q80ZI1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.1■■□□□ 1.77
Trnp1Q80ZI1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trnp1Q80ZI1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trnp1Q80ZI1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trnp1Q80ZI1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
Trnp1Q80ZI1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Trnp1Q80ZI1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.04■■□□□ 1.76
Trnp1Q80ZI1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.03■■□□□ 1.76
Trnp1Q80ZI1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnp1Q80ZI1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnp1Q80ZI1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.01■■□□□ 1.75
Trnp1Q80ZI1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Trnp1Q80ZI1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trnp1Q80ZI1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trnp1Q80ZI1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trnp1Q80ZI1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Trnp1Q80ZI1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trnp1Q80ZI1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trnp1Q80ZI1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.95■■□□□ 1.75
Trnp1Q80ZI1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Gm10232-201ENSMUST00000089221 720 ntBASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trnp1Q80ZI1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trnp1Q80ZI1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trnp1Q80ZI1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Trnp1Q80ZI1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms