Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timd4Q6U7R4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timd4Q6U7R4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timd4Q6U7R4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timd4Q6U7R4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timd4Q6U7R4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Timd4Q6U7R4 Terc-201ENSMUST00000082862 423 ntBASIC20.96■□□□□ 0.95
Timd4Q6U7R4 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.96■□□□□ 0.95
Timd4Q6U7R4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Timd4Q6U7R4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Timd4Q6U7R4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Timd4Q6U7R4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Timd4Q6U7R4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.94■□□□□ 0.94
Timd4Q6U7R4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Timd4Q6U7R4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Timd4Q6U7R4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Timd4Q6U7R4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Timd4Q6U7R4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Timd4Q6U7R4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.93■□□□□ 0.94
Timd4Q6U7R4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Timd4Q6U7R4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.91■□□□□ 0.94
Timd4Q6U7R4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Timd4Q6U7R4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Timd4Q6U7R4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Timd4Q6U7R4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Timd4Q6U7R4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
Timd4Q6U7R4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.89■□□□□ 0.93
Timd4Q6U7R4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Timd4Q6U7R4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Timd4Q6U7R4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.88■□□□□ 0.93
Timd4Q6U7R4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Timd4Q6U7R4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Timd4Q6U7R4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Timd4Q6U7R4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Timd4Q6U7R4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Timd4Q6U7R4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Timd4Q6U7R4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Timd4Q6U7R4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Timd4Q6U7R4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
Timd4Q6U7R4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Timd4Q6U7R4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Timd4Q6U7R4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.83■□□□□ 0.93
Timd4Q6U7R4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Timd4Q6U7R4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Timd4Q6U7R4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Timd4Q6U7R4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Timd4Q6U7R4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Timd4Q6U7R4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.81■□□□□ 0.92
Timd4Q6U7R4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Timd4Q6U7R4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Timd4Q6U7R4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Timd4Q6U7R4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Timd4Q6U7R4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Timd4Q6U7R4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
Timd4Q6U7R4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.79■□□□□ 0.92
Timd4Q6U7R4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Timd4Q6U7R4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Timd4Q6U7R4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Timd4Q6U7R4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Timd4Q6U7R4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Timd4Q6U7R4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms