Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.33■■□□□ 1.97
Npc1l1Q6T3U4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Npc1l1Q6T3U4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Npc1l1Q6T3U4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Npc1l1Q6T3U4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Npc1l1Q6T3U4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Npc1l1Q6T3U4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Npc1l1Q6T3U4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Npc1l1Q6T3U4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Npc1l1Q6T3U4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Npc1l1Q6T3U4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.29■■□□□ 1.96
Npc1l1Q6T3U4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Npc1l1Q6T3U4 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.28■■□□□ 1.96
Npc1l1Q6T3U4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.28■■□□□ 1.96
Npc1l1Q6T3U4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Npc1l1Q6T3U4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Npc1l1Q6T3U4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Npc1l1Q6T3U4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Npc1l1Q6T3U4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.27■■□□□ 1.96
Npc1l1Q6T3U4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.27■■□□□ 1.96
Npc1l1Q6T3U4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Npc1l1Q6T3U4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Npc1l1Q6T3U4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Npc1l1Q6T3U4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Npc1l1Q6T3U4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Npc1l1Q6T3U4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Npc1l1Q6T3U4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Npc1l1Q6T3U4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Npc1l1Q6T3U4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Npc1l1Q6T3U4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Npc1l1Q6T3U4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Npc1l1Q6T3U4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Npc1l1Q6T3U4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Npc1l1Q6T3U4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.23■■□□□ 1.95
Npc1l1Q6T3U4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Npc1l1Q6T3U4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Npc1l1Q6T3U4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.22■■□□□ 1.95
Npc1l1Q6T3U4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Npc1l1Q6T3U4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Npc1l1Q6T3U4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Npc1l1Q6T3U4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Npc1l1Q6T3U4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Npc1l1Q6T3U4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
Npc1l1Q6T3U4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Gm10420-201ENSMUST00000121713 882 ntBASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.19■■□□□ 1.94
Npc1l1Q6T3U4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Npc1l1Q6T3U4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Npc1l1Q6T3U4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Npc1l1Q6T3U4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Npc1l1Q6T3U4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Npc1l1Q6T3U4 Gm44428-201ENSMUST00000204474 874 ntBASIC27.16■■□□□ 1.94
Npc1l1Q6T3U4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Npc1l1Q6T3U4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Npc1l1Q6T3U4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Npc1l1Q6T3U4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.13■■□□□ 1.93
Npc1l1Q6T3U4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.13■■□□□ 1.93
Npc1l1Q6T3U4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
Npc1l1Q6T3U4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Npc1l1Q6T3U4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Npc1l1Q6T3U4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Npc1l1Q6T3U4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.1■■□□□ 1.93
Npc1l1Q6T3U4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Npc1l1Q6T3U4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Npc1l1Q6T3U4 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.09■■□□□ 1.93
Npc1l1Q6T3U4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Npc1l1Q6T3U4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Npc1l1Q6T3U4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
Npc1l1Q6T3U4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.07■■□□□ 1.92
Npc1l1Q6T3U4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Npc1l1Q6T3U4 Gm5812-201ENSMUST00000061073 957 ntBASIC27.07■■□□□ 1.92
Npc1l1Q6T3U4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Npc1l1Q6T3U4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Gm5921-201ENSMUST00000075898 882 ntBASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Npc1l1Q6T3U4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Npc1l1Q6T3U4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms