Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.42■□□□□ 0.54
Zic4Q61467 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zic4Q61467 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zic4Q61467 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zic4Q61467 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zic4Q61467 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zic4Q61467 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zic4Q61467 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.4■□□□□ 0.54
Zic4Q61467 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zic4Q61467 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zic4Q61467 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zic4Q61467 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zic4Q61467 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zic4Q61467 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zic4Q61467 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zic4Q61467 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Zic4Q61467 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Zic4Q61467 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zic4Q61467 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zic4Q61467 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zic4Q61467 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zic4Q61467 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zic4Q61467 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zic4Q61467 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zic4Q61467 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zic4Q61467 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zic4Q61467 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zic4Q61467 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zic4Q61467 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zic4Q61467 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Zic4Q61467 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zic4Q61467 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.34■□□□□ 0.53
Zic4Q61467 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zic4Q61467 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zic4Q61467 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zic4Q61467 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Zic4Q61467 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Zic4Q61467 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zic4Q61467 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zic4Q61467 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zic4Q61467 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zic4Q61467 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zic4Q61467 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zic4Q61467 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zic4Q61467 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zic4Q61467 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zic4Q61467 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zic4Q61467 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.3■□□□□ 0.52
Zic4Q61467 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Zic4Q61467 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.3■□□□□ 0.52
Zic4Q61467 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zic4Q61467 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Zic4Q61467 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zic4Q61467 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Zic4Q61467 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.29■□□□□ 0.52
Zic4Q61467 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zic4Q61467 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zic4Q61467 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.28■□□□□ 0.52
Zic4Q61467 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.28■□□□□ 0.52
Zic4Q61467 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Zic4Q61467 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zic4Q61467 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zic4Q61467 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zic4Q61467 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.27■□□□□ 0.52
Zic4Q61467 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zic4Q61467 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.27■□□□□ 0.52
Zic4Q61467 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Zic4Q61467 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zic4Q61467 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.26■□□□□ 0.51
Zic4Q61467 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zic4Q61467 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Zic4Q61467 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.25■□□□□ 0.51
Zic4Q61467 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zic4Q61467 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Zic4Q61467 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.24■□□□□ 0.51
Zic4Q61467 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zic4Q61467 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
Zic4Q61467 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Zic4Q61467 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zic4Q61467 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Zic4Q61467 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zic4Q61467 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zic4Q61467 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zic4Q61467 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms