Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5d-4Q5R1F6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav5d-4Q5R1F6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trav5d-4Q5R1F6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.27■□□□□ 0.68
Trav5d-4Q5R1F6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav5d-4Q5R1F6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav5d-4Q5R1F6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav5d-4Q5R1F6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav5d-4Q5R1F6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav5d-4Q5R1F6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Mir3960-201ENSMUST00000198213 73 ntBASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5d-4Q5R1F6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav5d-4Q5R1F6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav5d-4Q5R1F6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav5d-4Q5R1F6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav5d-4Q5R1F6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5d-4Q5R1F6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5d-4Q5R1F6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5d-4Q5R1F6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav5d-4Q5R1F6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav5d-4Q5R1F6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav5d-4Q5R1F6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav5d-4Q5R1F6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5d-4Q5R1F6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav5d-4Q5R1F6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav5d-4Q5R1F6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav5d-4Q5R1F6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav5d-4Q5R1F6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5d-4Q5R1F6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav5d-4Q5R1F6 Gm45364-201ENSMUST00000210883 159 ntBASIC19.19■□□□□ 0.66
Trav5d-4Q5R1F6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trav5d-4Q5R1F6 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.19■□□□□ 0.66
Trav5d-4Q5R1F6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav5d-4Q5R1F6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.18■□□□□ 0.66
Trav5d-4Q5R1F6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5d-4Q5R1F6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Trav5d-4Q5R1F6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav5d-4Q5R1F6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
Trav5d-4Q5R1F6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5d-4Q5R1F6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.16■□□□□ 0.66
Trav5d-4Q5R1F6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav5d-4Q5R1F6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5d-4Q5R1F6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav5d-4Q5R1F6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav5d-4Q5R1F6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav5d-4Q5R1F6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trav5d-4Q5R1F6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav5d-4Q5R1F6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5d-4Q5R1F6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5d-4Q5R1F6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav5d-4Q5R1F6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav5d-4Q5R1F6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.11■□□□□ 0.65
Trav5d-4Q5R1F6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms