Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prune2Q52KR3 Gm21956-201ENSMUST00000179946 522 ntBASIC21.78■■□□□ 1.08
Prune2Q52KR3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.78■■□□□ 1.08
Prune2Q52KR3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prune2Q52KR3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prune2Q52KR3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prune2Q52KR3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prune2Q52KR3 Terc-201ENSMUST00000082862 423 ntBASIC21.78■■□□□ 1.08
Prune2Q52KR3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Prune2Q52KR3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prune2Q52KR3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prune2Q52KR3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Prune2Q52KR3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.76■■□□□ 1.07
Prune2Q52KR3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.76■■□□□ 1.07
Prune2Q52KR3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prune2Q52KR3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prune2Q52KR3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.75■■□□□ 1.07
Prune2Q52KR3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.75■■□□□ 1.07
Prune2Q52KR3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prune2Q52KR3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.74■■□□□ 1.07
Prune2Q52KR3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.74■■□□□ 1.07
Prune2Q52KR3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prune2Q52KR3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prune2Q52KR3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prune2Q52KR3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prune2Q52KR3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prune2Q52KR3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.73■■□□□ 1.07
Prune2Q52KR3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prune2Q52KR3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.72■■□□□ 1.07
Prune2Q52KR3 Gm44428-201ENSMUST00000204474 874 ntBASIC21.72■■□□□ 1.07
Prune2Q52KR3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prune2Q52KR3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prune2Q52KR3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prune2Q52KR3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prune2Q52KR3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.71■■□□□ 1.07
Prune2Q52KR3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prune2Q52KR3 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.71■■□□□ 1.07
Prune2Q52KR3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prune2Q52KR3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prune2Q52KR3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prune2Q52KR3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prune2Q52KR3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.7■■□□□ 1.06
Prune2Q52KR3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prune2Q52KR3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Prune2Q52KR3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Prune2Q52KR3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prune2Q52KR3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.68■■□□□ 1.06
Prune2Q52KR3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prune2Q52KR3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prune2Q52KR3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prune2Q52KR3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Prune2Q52KR3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Prune2Q52KR3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prune2Q52KR3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.66■■□□□ 1.06
Prune2Q52KR3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.66■■□□□ 1.06
Prune2Q52KR3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Prune2Q52KR3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prune2Q52KR3 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.66■■□□□ 1.06
Prune2Q52KR3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prune2Q52KR3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prune2Q52KR3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.65■■□□□ 1.06
Prune2Q52KR3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Prune2Q52KR3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prune2Q52KR3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.63■■□□□ 1.05
Prune2Q52KR3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prune2Q52KR3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.63■■□□□ 1.05
Prune2Q52KR3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prune2Q52KR3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.62■■□□□ 1.05
Prune2Q52KR3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prune2Q52KR3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prune2Q52KR3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.61■■□□□ 1.05
Prune2Q52KR3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prune2Q52KR3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prune2Q52KR3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.6■■□□□ 1.05
Prune2Q52KR3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prune2Q52KR3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prune2Q52KR3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Prune2Q52KR3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prune2Q52KR3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.58■■□□□ 1.05
Prune2Q52KR3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Prune2Q52KR3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.58■■□□□ 1.04
Prune2Q52KR3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prune2Q52KR3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prune2Q52KR3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prune2Q52KR3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prune2Q52KR3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prune2Q52KR3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prune2Q52KR3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prune2Q52KR3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.55■■□□□ 1.04
Prune2Q52KR3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms