Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28bQ45KJ6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28bQ45KJ6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28bQ45KJ6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28bQ45KJ6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lin28bQ45KJ6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lin28bQ45KJ6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lin28bQ45KJ6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lin28bQ45KJ6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.46■■□□□ 1.03
Lin28bQ45KJ6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Lin28bQ45KJ6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lin28bQ45KJ6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.45■■□□□ 1.02
Lin28bQ45KJ6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28bQ45KJ6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28bQ45KJ6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28bQ45KJ6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28bQ45KJ6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Lin28bQ45KJ6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28bQ45KJ6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28bQ45KJ6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28bQ45KJ6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lin28bQ45KJ6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.42■■□□□ 1.02
Lin28bQ45KJ6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.42■■□□□ 1.02
Lin28bQ45KJ6 Gm5921-201ENSMUST00000075898 882 ntBASIC21.42■■□□□ 1.02
Lin28bQ45KJ6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Lin28bQ45KJ6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lin28bQ45KJ6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.41■■□□□ 1.02
Lin28bQ45KJ6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lin28bQ45KJ6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lin28bQ45KJ6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Lin28bQ45KJ6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lin28bQ45KJ6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28bQ45KJ6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28bQ45KJ6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28bQ45KJ6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28bQ45KJ6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lin28bQ45KJ6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lin28bQ45KJ6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lin28bQ45KJ6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28bQ45KJ6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28bQ45KJ6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28bQ45KJ6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lin28bQ45KJ6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Lin28bQ45KJ6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28bQ45KJ6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28bQ45KJ6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28bQ45KJ6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28bQ45KJ6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28bQ45KJ6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28bQ45KJ6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Lin28bQ45KJ6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lin28bQ45KJ6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lin28bQ45KJ6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lin28bQ45KJ6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28bQ45KJ6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lin28bQ45KJ6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lin28bQ45KJ6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Lin28bQ45KJ6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Lin28bQ45KJ6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Lin28bQ45KJ6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lin28bQ45KJ6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lin28bQ45KJ6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.31■■□□□ 1
Lin28bQ45KJ6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lin28bQ45KJ6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lin28bQ45KJ6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.3■■□□□ 1
Lin28bQ45KJ6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Lin28bQ45KJ6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.3■■□□□ 1
Lin28bQ45KJ6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.3■■□□□ 1
Lin28bQ45KJ6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin28bQ45KJ6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin28bQ45KJ6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lin28bQ45KJ6 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.28■■□□□ 1
Lin28bQ45KJ6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lin28bQ45KJ6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms