Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1brtQ3UNC9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cks1brtQ3UNC9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1brtQ3UNC9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1brtQ3UNC9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cks1brtQ3UNC9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cks1brtQ3UNC9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cks1brtQ3UNC9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1brtQ3UNC9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1brtQ3UNC9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1brtQ3UNC9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1brtQ3UNC9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1brtQ3UNC9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cks1brtQ3UNC9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cks1brtQ3UNC9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cks1brtQ3UNC9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cks1brtQ3UNC9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.27■□□□□ 0.19
Cks1brtQ3UNC9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cks1brtQ3UNC9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cks1brtQ3UNC9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1brtQ3UNC9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1brtQ3UNC9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1brtQ3UNC9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1brtQ3UNC9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cks1brtQ3UNC9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1brtQ3UNC9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.23■□□□□ 0.19
Cks1brtQ3UNC9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cks1brtQ3UNC9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cks1brtQ3UNC9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1brtQ3UNC9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1brtQ3UNC9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1brtQ3UNC9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1brtQ3UNC9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1brtQ3UNC9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cks1brtQ3UNC9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.2■□□□□ 0.18
Cks1brtQ3UNC9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cks1brtQ3UNC9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cks1brtQ3UNC9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.2■□□□□ 0.18
Cks1brtQ3UNC9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1brtQ3UNC9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cks1brtQ3UNC9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1brtQ3UNC9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1brtQ3UNC9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cks1brtQ3UNC9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1brtQ3UNC9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1brtQ3UNC9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 235.5 ms