Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Uspl1Q3ULM6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC29.51■■■□□ 2.32
Uspl1Q3ULM6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
Uspl1Q3ULM6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Uspl1Q3ULM6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Uspl1Q3ULM6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Uspl1Q3ULM6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Uspl1Q3ULM6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Uspl1Q3ULM6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Uspl1Q3ULM6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Uspl1Q3ULM6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Uspl1Q3ULM6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Uspl1Q3ULM6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Uspl1Q3ULM6 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.47■■■□□ 2.31
Uspl1Q3ULM6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Uspl1Q3ULM6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC29.47■■■□□ 2.31
Uspl1Q3ULM6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Uspl1Q3ULM6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Uspl1Q3ULM6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29.46■■■□□ 2.31
Uspl1Q3ULM6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Uspl1Q3ULM6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Uspl1Q3ULM6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.45■■■□□ 2.31
Uspl1Q3ULM6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC29.45■■■□□ 2.3
Uspl1Q3ULM6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Uspl1Q3ULM6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Uspl1Q3ULM6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
Uspl1Q3ULM6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Uspl1Q3ULM6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Uspl1Q3ULM6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Uspl1Q3ULM6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Uspl1Q3ULM6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Uspl1Q3ULM6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Uspl1Q3ULM6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Gm11687-201ENSMUST00000118911 886 ntBASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Uspl1Q3ULM6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29.39■■■□□ 2.3
Uspl1Q3ULM6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Uspl1Q3ULM6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
Uspl1Q3ULM6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC29.39■■■□□ 2.3
Uspl1Q3ULM6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Uspl1Q3ULM6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Uspl1Q3ULM6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Uspl1Q3ULM6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Uspl1Q3ULM6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Uspl1Q3ULM6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Uspl1Q3ULM6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.38■■■□□ 2.29
Uspl1Q3ULM6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Uspl1Q3ULM6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC29.37■■■□□ 2.29
Uspl1Q3ULM6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC29.37■■■□□ 2.29
Uspl1Q3ULM6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.37■■■□□ 2.29
Uspl1Q3ULM6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC29.37■■■□□ 2.29
Uspl1Q3ULM6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Uspl1Q3ULM6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Uspl1Q3ULM6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Uspl1Q3ULM6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Uspl1Q3ULM6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Uspl1Q3ULM6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Uspl1Q3ULM6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Uspl1Q3ULM6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Uspl1Q3ULM6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.35■■■□□ 2.29
Uspl1Q3ULM6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC29.34■■■□□ 2.29
Uspl1Q3ULM6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Uspl1Q3ULM6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Uspl1Q3ULM6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Uspl1Q3ULM6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Uspl1Q3ULM6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Uspl1Q3ULM6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Uspl1Q3ULM6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Uspl1Q3ULM6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC29.32■■■□□ 2.28
Uspl1Q3ULM6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Uspl1Q3ULM6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Uspl1Q3ULM6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Uspl1Q3ULM6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC29.3■■■□□ 2.28
Uspl1Q3ULM6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Uspl1Q3ULM6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.3■■■□□ 2.28
Uspl1Q3ULM6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Uspl1Q3ULM6 Mir6538-201ENSMUST00000183713 110 ntBASIC29.29■■■□□ 2.28
Uspl1Q3ULM6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Uspl1Q3ULM6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Uspl1Q3ULM6 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.27■■■□□ 2.28
Uspl1Q3ULM6 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.27■■■□□ 2.28
Uspl1Q3ULM6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC29.26■■■□□ 2.28
Uspl1Q3ULM6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Uspl1Q3ULM6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Uspl1Q3ULM6 Gm44428-201ENSMUST00000204474 874 ntBASIC29.25■■■□□ 2.27
Uspl1Q3ULM6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Uspl1Q3ULM6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Uspl1Q3ULM6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Uspl1Q3ULM6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Uspl1Q3ULM6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Uspl1Q3ULM6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms