Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab42Q0PD08 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab42Q0PD08 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab42Q0PD08 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab42Q0PD08 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.77■□□□□ 0.76
Rab42Q0PD08 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab42Q0PD08 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab42Q0PD08 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab42Q0PD08 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab42Q0PD08 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab42Q0PD08 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab42Q0PD08 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab42Q0PD08 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Rab42Q0PD08 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab42Q0PD08 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rab42Q0PD08 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rab42Q0PD08 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab42Q0PD08 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.74■□□□□ 0.75
Rab42Q0PD08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.74■□□□□ 0.75
Rab42Q0PD08 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rab42Q0PD08 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab42Q0PD08 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab42Q0PD08 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab42Q0PD08 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab42Q0PD08 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab42Q0PD08 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab42Q0PD08 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.71■□□□□ 0.75
Rab42Q0PD08 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab42Q0PD08 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab42Q0PD08 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.7■□□□□ 0.74
Rab42Q0PD08 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab42Q0PD08 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab42Q0PD08 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rab42Q0PD08 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab42Q0PD08 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.68■□□□□ 0.74
Rab42Q0PD08 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab42Q0PD08 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab42Q0PD08 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Gm30023-201ENSMUST00000197970 889 ntBASIC19.67■□□□□ 0.74
Rab42Q0PD08 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.67■□□□□ 0.74
Rab42Q0PD08 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.66■□□□□ 0.74
Rab42Q0PD08 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rab42Q0PD08 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.65■□□□□ 0.74
Rab42Q0PD08 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab42Q0PD08 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.65■□□□□ 0.74
Rab42Q0PD08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab42Q0PD08 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab42Q0PD08 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab42Q0PD08 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rab42Q0PD08 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.63■□□□□ 0.73
Rab42Q0PD08 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab42Q0PD08 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab42Q0PD08 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab42Q0PD08 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab42Q0PD08 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab42Q0PD08 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab42Q0PD08 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab42Q0PD08 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rab42Q0PD08 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.61■□□□□ 0.73
Rab42Q0PD08 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab42Q0PD08 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab42Q0PD08 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rab42Q0PD08 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms