Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Thbs3Q05895 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.74■□□□□ 0.75
Thbs3Q05895 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Thbs3Q05895 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs3Q05895 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs3Q05895 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.74■□□□□ 0.75
Thbs3Q05895 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs3Q05895 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs3Q05895 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.74■□□□□ 0.75
Thbs3Q05895 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs3Q05895 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs3Q05895 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs3Q05895 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs3Q05895 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Thbs3Q05895 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.72■□□□□ 0.75
Thbs3Q05895 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Scarna2-201ENSMUST00000157560 414 ntBASIC19.72■□□□□ 0.75
Thbs3Q05895 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thbs3Q05895 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 Gm9806-201ENSMUST00000051080 552 ntBASIC19.71■□□□□ 0.75
Thbs3Q05895 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Thbs3Q05895 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Thbs3Q05895 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thbs3Q05895 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
Thbs3Q05895 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Thbs3Q05895 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Thbs3Q05895 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thbs3Q05895 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Thbs3Q05895 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thbs3Q05895 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thbs3Q05895 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thbs3Q05895 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thbs3Q05895 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thbs3Q05895 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.68■□□□□ 0.74
Thbs3Q05895 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thbs3Q05895 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thbs3Q05895 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Thbs3Q05895 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thbs3Q05895 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thbs3Q05895 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thbs3Q05895 Gm11687-201ENSMUST00000118911 886 ntBASIC19.67■□□□□ 0.74
Thbs3Q05895 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Thbs3Q05895 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thbs3Q05895 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.67■□□□□ 0.74
Thbs3Q05895 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thbs3Q05895 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Gm16437-201ENSMUST00000025669 507 ntBASIC19.66■□□□□ 0.74
Thbs3Q05895 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Thbs3Q05895 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.65■□□□□ 0.74
Thbs3Q05895 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thbs3Q05895 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Thbs3Q05895 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Thbs3Q05895 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thbs3Q05895 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Thbs3Q05895 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thbs3Q05895 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.65■□□□□ 0.74
Thbs3Q05895 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thbs3Q05895 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.65■□□□□ 0.74
Thbs3Q05895 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thbs3Q05895 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Thbs3Q05895 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thbs3Q05895 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thbs3Q05895 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thbs3Q05895 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thbs3Q05895 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thbs3Q05895 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thbs3Q05895 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thbs3Q05895 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Thbs3Q05895 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.62■□□□□ 0.73
Thbs3Q05895 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.62■□□□□ 0.73
Thbs3Q05895 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thbs3Q05895 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thbs3Q05895 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thbs3Q05895 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.62■□□□□ 0.73
Thbs3Q05895 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.62■□□□□ 0.73
Thbs3Q05895 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thbs3Q05895 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thbs3Q05895 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.6■□□□□ 0.73
Thbs3Q05895 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms