Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col10a1Q05306 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col10a1Q05306 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col10a1Q05306 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.7■□□□□ 0.9
Col10a1Q05306 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col10a1Q05306 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col10a1Q05306 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col10a1Q05306 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.7■□□□□ 0.9
Col10a1Q05306 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col10a1Q05306 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col10a1Q05306 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Col10a1Q05306 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col10a1Q05306 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.69■□□□□ 0.9
Col10a1Q05306 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Col10a1Q05306 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col10a1Q05306 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col10a1Q05306 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col10a1Q05306 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col10a1Q05306 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col10a1Q05306 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col10a1Q05306 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.65■□□□□ 0.9
Col10a1Q05306 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col10a1Q05306 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col10a1Q05306 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col10a1Q05306 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col10a1Q05306 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col10a1Q05306 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.64■□□□□ 0.89
Col10a1Q05306 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col10a1Q05306 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col10a1Q05306 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col10a1Q05306 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col10a1Q05306 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Col10a1Q05306 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col10a1Q05306 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col10a1Q05306 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col10a1Q05306 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col10a1Q05306 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col10a1Q05306 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col10a1Q05306 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col10a1Q05306 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col10a1Q05306 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col10a1Q05306 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col10a1Q05306 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col10a1Q05306 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col10a1Q05306 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col10a1Q05306 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col10a1Q05306 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col10a1Q05306 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Col10a1Q05306 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.6■□□□□ 0.89
Col10a1Q05306 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.6■□□□□ 0.89
Col10a1Q05306 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col10a1Q05306 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col10a1Q05306 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col10a1Q05306 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.59■□□□□ 0.89
Col10a1Q05306 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.59■□□□□ 0.89
Col10a1Q05306 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col10a1Q05306 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col10a1Q05306 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col10a1Q05306 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col10a1Q05306 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col10a1Q05306 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col10a1Q05306 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col10a1Q05306 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col10a1Q05306 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col10a1Q05306 Mir6538-201ENSMUST00000183713 110 ntBASIC20.58■□□□□ 0.89
Col10a1Q05306 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.58■□□□□ 0.89
Col10a1Q05306 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col10a1Q05306 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col10a1Q05306 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col10a1Q05306 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col10a1Q05306 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col10a1Q05306 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.57■□□□□ 0.88
Col10a1Q05306 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col10a1Q05306 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col10a1Q05306 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Col10a1Q05306 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.56■□□□□ 0.88
Col10a1Q05306 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col10a1Q05306 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.56■□□□□ 0.88
Col10a1Q05306 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col10a1Q05306 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col10a1Q05306 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col10a1Q05306 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col10a1Q05306 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Col10a1Q05306 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col10a1Q05306 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col10a1Q05306 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col10a1Q05306 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col10a1Q05306 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col10a1Q05306 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col10a1Q05306 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col10a1Q05306 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col10a1Q05306 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
Col10a1Q05306 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col10a1Q05306 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms