Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Npas1P97459 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas1P97459 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas1P97459 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Npas1P97459 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas1P97459 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.78■□□□□ 0.6
Npas1P97459 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas1P97459 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas1P97459 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.77■□□□□ 0.6
Npas1P97459 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Npas1P97459 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.77■□□□□ 0.6
Npas1P97459 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npas1P97459 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas1P97459 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.76■□□□□ 0.59
Npas1P97459 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.76■□□□□ 0.59
Npas1P97459 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas1P97459 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas1P97459 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npas1P97459 Gm30023-201ENSMUST00000197970 889 ntBASIC18.75■□□□□ 0.59
Npas1P97459 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas1P97459 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npas1P97459 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npas1P97459 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npas1P97459 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npas1P97459 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.73■□□□□ 0.59
Npas1P97459 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Npas1P97459 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npas1P97459 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npas1P97459 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npas1P97459 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npas1P97459 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.71■□□□□ 0.59
Npas1P97459 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.71■□□□□ 0.59
Npas1P97459 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
Npas1P97459 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npas1P97459 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Npas1P97459 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Npas1P97459 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Npas1P97459 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 Zfp131-205ENSMUST00000223812 663 ntBASIC18.7■□□□□ 0.58
Npas1P97459 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npas1P97459 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npas1P97459 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npas1P97459 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas1P97459 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npas1P97459 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas1P97459 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas1P97459 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas1P97459 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas1P97459 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas1P97459 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas1P97459 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas1P97459 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas1P97459 Gm9397-201ENSMUST00000200125 605 ntBASIC18.65■□□□□ 0.58
Npas1P97459 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.65■□□□□ 0.58
Npas1P97459 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas1P97459 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Npas1P97459 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas1P97459 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Npas1P97459 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Npas1P97459 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Npas1P97459 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Npas1P97459 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Npas1P97459 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npas1P97459 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npas1P97459 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npas1P97459 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npas1P97459 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npas1P97459 Particl-201ENSMUST00000205370 1560 ntBASIC18.64■□□□□ 0.57
Npas1P97459 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas1P97459 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Npas1P97459 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npas1P97459 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Npas1P97459 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.62■□□□□ 0.57
Npas1P97459 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Npas1P97459 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas1P97459 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Gm24970-201ENSMUST00000175582 82 ntBASIC18.61■□□□□ 0.57
Npas1P97459 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npas1P97459 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas1P97459 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas1P97459 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas1P97459 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas1P97459 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Npas1P97459 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms