Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim4P70271 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim4P70271 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 Scarna2-201ENSMUST00000157560 414 ntBASIC18.57■□□□□ 0.56
Pdlim4P70271 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim4P70271 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pdlim4P70271 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pdlim4P70271 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim4P70271 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdlim4P70271 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdlim4P70271 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim4P70271 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim4P70271 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim4P70271 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim4P70271 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim4P70271 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim4P70271 Gm9806-201ENSMUST00000051080 552 ntBASIC18.55■□□□□ 0.56
Pdlim4P70271 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pdlim4P70271 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim4P70271 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim4P70271 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pdlim4P70271 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim4P70271 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim4P70271 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim4P70271 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim4P70271 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim4P70271 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim4P70271 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim4P70271 Gm11687-201ENSMUST00000118911 886 ntBASIC18.53■□□□□ 0.56
Pdlim4P70271 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim4P70271 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim4P70271 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim4P70271 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim4P70271 Terc-201ENSMUST00000082862 423 ntBASIC18.52■□□□□ 0.56
Pdlim4P70271 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim4P70271 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.51■□□□□ 0.55
Pdlim4P70271 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim4P70271 Gm16437-201ENSMUST00000025669 507 ntBASIC18.51■□□□□ 0.55
Pdlim4P70271 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim4P70271 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim4P70271 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.51■□□□□ 0.55
Pdlim4P70271 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.51■□□□□ 0.55
Pdlim4P70271 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim4P70271 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim4P70271 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim4P70271 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim4P70271 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.49■□□□□ 0.55
Pdlim4P70271 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim4P70271 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.48■□□□□ 0.55
Pdlim4P70271 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.48■□□□□ 0.55
Pdlim4P70271 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.48■□□□□ 0.55
Pdlim4P70271 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim4P70271 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim4P70271 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pdlim4P70271 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim4P70271 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim4P70271 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim4P70271 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim4P70271 Gm11175-201ENSMUST00000116172 543 ntBASIC18.46■□□□□ 0.55
Pdlim4P70271 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim4P70271 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.45■□□□□ 0.54
Pdlim4P70271 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim4P70271 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim4P70271 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim4P70271 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdlim4P70271 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim4P70271 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim4P70271 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim4P70271 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim4P70271 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim4P70271 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim4P70271 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim4P70271 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pdlim4P70271 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim4P70271 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.43■□□□□ 0.54
Pdlim4P70271 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms