Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
Hmgb1P63158 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.65■■□□□ 1.54
Hmgb1P63158 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgb1P63158 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgb1P63158 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgb1P63158 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Hmgb1P63158 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Hmgb1P63158 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.63■■□□□ 1.53
Hmgb1P63158 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Hmgb1P63158 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hmgb1P63158 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hmgb1P63158 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hmgb1P63158 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Hmgb1P63158 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Gm7432-201ENSMUST00000210343 879 ntBASIC24.6■■□□□ 1.53
Hmgb1P63158 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.6■■□□□ 1.53
Hmgb1P63158 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgb1P63158 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.58■■□□□ 1.53
Hmgb1P63158 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Hmgb1P63158 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
Hmgb1P63158 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgb1P63158 Gm9812-201ENSMUST00000061934 968 ntBASIC24.57■■□□□ 1.52
Hmgb1P63158 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgb1P63158 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Hmgb1P63158 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Hmgb1P63158 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgb1P63158 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.55■■□□□ 1.52
Hmgb1P63158 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Hmgb1P63158 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Hmgb1P63158 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Hmgb1P63158 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgb1P63158 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Hmgb1P63158 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Hmgb1P63158 Mir3960-201ENSMUST00000198213 73 ntBASIC24.52■■□□□ 1.52
Hmgb1P63158 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Hmgb1P63158 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgb1P63158 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgb1P63158 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.51■■□□□ 1.51
Hmgb1P63158 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Hmgb1P63158 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.5■■□□□ 1.51
Hmgb1P63158 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.5■■□□□ 1.51
Hmgb1P63158 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Hmgb1P63158 Gm11599-201ENSMUST00000118720 878 ntBASIC24.49■■□□□ 1.51
Hmgb1P63158 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.49■■□□□ 1.51
Hmgb1P63158 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgb1P63158 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgb1P63158 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.48■■□□□ 1.51
Hmgb1P63158 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Hmgb1P63158 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgb1P63158 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.46■■□□□ 1.51
Hmgb1P63158 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.45■■□□□ 1.51
Hmgb1P63158 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.45■■□□□ 1.51
Hmgb1P63158 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgb1P63158 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgb1P63158 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms