Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Lhx1P63006 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
Lhx1P63006 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.25■■□□□ 1.15
Lhx1P63006 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lhx1P63006 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lhx1P63006 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lhx1P63006 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lhx1P63006 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Lhx1P63006 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.23■■□□□ 1.15
Lhx1P63006 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Lhx1P63006 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Lhx1P63006 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lhx1P63006 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.21■■□□□ 1.15
Lhx1P63006 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Lhx1P63006 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lhx1P63006 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.21■■□□□ 1.15
Lhx1P63006 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lhx1P63006 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lhx1P63006 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lhx1P63006 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.2■■□□□ 1.14
Lhx1P63006 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lhx1P63006 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lhx1P63006 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lhx1P63006 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.19■■□□□ 1.14
Lhx1P63006 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lhx1P63006 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.19■■□□□ 1.14
Lhx1P63006 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Lhx1P63006 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lhx1P63006 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Lhx1P63006 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lhx1P63006 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.17■■□□□ 1.14
Lhx1P63006 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
Lhx1P63006 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lhx1P63006 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lhx1P63006 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Lhx1P63006 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lhx1P63006 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lhx1P63006 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.15■■□□□ 1.14
Lhx1P63006 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Lhx1P63006 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Lhx1P63006 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.14■■□□□ 1.13
Lhx1P63006 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Lhx1P63006 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lhx1P63006 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Lhx1P63006 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lhx1P63006 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.13■■□□□ 1.13
Lhx1P63006 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lhx1P63006 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lhx1P63006 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lhx1P63006 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lhx1P63006 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lhx1P63006 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.11■■□□□ 1.13
Lhx1P63006 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lhx1P63006 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lhx1P63006 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lhx1P63006 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lhx1P63006 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lhx1P63006 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lhx1P63006 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lhx1P63006 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.1■■□□□ 1.13
Lhx1P63006 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Lhx1P63006 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lhx1P63006 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lhx1P63006 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lhx1P63006 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lhx1P63006 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
Lhx1P63006 Gm10420-201ENSMUST00000121713 882 ntBASIC22.08■■□□□ 1.13
Lhx1P63006 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lhx1P63006 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.08■■□□□ 1.13
Lhx1P63006 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lhx1P63006 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lhx1P63006 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lhx1P63006 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lhx1P63006 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lhx1P63006 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.06■■□□□ 1.12
Lhx1P63006 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lhx1P63006 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lhx1P63006 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lhx1P63006 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.05■■□□□ 1.12
Lhx1P63006 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Lhx1P63006 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Lhx1P63006 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.04■■□□□ 1.12
Lhx1P63006 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lhx1P63006 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.04■■□□□ 1.12
Lhx1P63006 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lhx1P63006 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Lhx1P63006 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lhx1P63006 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.03■■□□□ 1.12
Lhx1P63006 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.03■■□□□ 1.12
Lhx1P63006 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms