Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gabra1P62812 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gabra1P62812 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.93■□□□□ 0.62
Gabra1P62812 Particl-201ENSMUST00000205370 1560 ntBASIC18.93■□□□□ 0.62
Gabra1P62812 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gabra1P62812 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gabra1P62812 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.93■□□□□ 0.62
Gabra1P62812 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gabra1P62812 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.92■□□□□ 0.62
Gabra1P62812 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gabra1P62812 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gabra1P62812 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gabra1P62812 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.91■□□□□ 0.62
Gabra1P62812 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gabra1P62812 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gabra1P62812 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gabra1P62812 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gabra1P62812 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gabra1P62812 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gabra1P62812 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gabra1P62812 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gabra1P62812 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gabra1P62812 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gabra1P62812 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Gabra1P62812 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gabra1P62812 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gabra1P62812 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gabra1P62812 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gabra1P62812 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gabra1P62812 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.88■□□□□ 0.61
Gabra1P62812 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Gabra1P62812 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gabra1P62812 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gabra1P62812 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gabra1P62812 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gabra1P62812 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gabra1P62812 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gabra1P62812 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gabra1P62812 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gabra1P62812 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gabra1P62812 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gabra1P62812 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gabra1P62812 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Gabra1P62812 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gabra1P62812 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gabra1P62812 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.85■□□□□ 0.61
Gabra1P62812 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gabra1P62812 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gabra1P62812 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gabra1P62812 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gabra1P62812 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gabra1P62812 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gabra1P62812 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gabra1P62812 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gabra1P62812 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gabra1P62812 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gabra1P62812 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.82■□□□□ 0.6
Gabra1P62812 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.82■□□□□ 0.6
Gabra1P62812 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gabra1P62812 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Gabra1P62812 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gabra1P62812 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
Gabra1P62812 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gabra1P62812 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Gabra1P62812 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gabra1P62812 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gabra1P62812 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gabra1P62812 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gabra1P62812 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.8■□□□□ 0.6
Gabra1P62812 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.8■□□□□ 0.6
Gabra1P62812 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gabra1P62812 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gabra1P62812 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gabra1P62812 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gabra1P62812 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.79■□□□□ 0.6
Gabra1P62812 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gabra1P62812 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gabra1P62812 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.79■□□□□ 0.6
Gabra1P62812 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gabra1P62812 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gabra1P62812 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gabra1P62812 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gabra1P62812 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gabra1P62812 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gabra1P62812 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Gabra1P62812 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gabra1P62812 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.77■□□□□ 0.6
Gabra1P62812 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gabra1P62812 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms