Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ythdf1P59326 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ythdf1P59326 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ythdf1P59326 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ythdf1P59326 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf1P59326 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf1P59326 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ythdf1P59326 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf1P59326 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf1P59326 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ythdf1P59326 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ythdf1P59326 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf1P59326 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf1P59326 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.84■■□□□ 1.09
Ythdf1P59326 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ythdf1P59326 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
Ythdf1P59326 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf1P59326 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ythdf1P59326 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf1P59326 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf1P59326 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.83■■□□□ 1.09
Ythdf1P59326 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Ythdf1P59326 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf1P59326 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf1P59326 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Ythdf1P59326 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ythdf1P59326 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ythdf1P59326 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ythdf1P59326 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.81■■□□□ 1.08
Ythdf1P59326 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ythdf1P59326 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ythdf1P59326 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf1P59326 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Ythdf1P59326 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf1P59326 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf1P59326 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf1P59326 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf1P59326 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf1P59326 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ythdf1P59326 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf1P59326 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ythdf1P59326 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ythdf1P59326 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ythdf1P59326 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ythdf1P59326 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ythdf1P59326 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ythdf1P59326 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ythdf1P59326 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Ythdf1P59326 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.74■■□□□ 1.07
Ythdf1P59326 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ythdf1P59326 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ythdf1P59326 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ythdf1P59326 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ythdf1P59326 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ythdf1P59326 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ythdf1P59326 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ythdf1P59326 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ythdf1P59326 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.72■■□□□ 1.07
Ythdf1P59326 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.72■■□□□ 1.07
Ythdf1P59326 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ythdf1P59326 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ythdf1P59326 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ythdf1P59326 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.7■■□□□ 1.07
Ythdf1P59326 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ythdf1P59326 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ythdf1P59326 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ythdf1P59326 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.69■■□□□ 1.06
Ythdf1P59326 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ythdf1P59326 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ythdf1P59326 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ythdf1P59326 Gm30023-201ENSMUST00000197970 889 ntBASIC21.68■■□□□ 1.06
Ythdf1P59326 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.68■■□□□ 1.06
Ythdf1P59326 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.68■■□□□ 1.06
Ythdf1P59326 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ythdf1P59326 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ythdf1P59326 Notumos-201ENSMUST00000151998 2659 ntBASIC21.67■■□□□ 1.06
Ythdf1P59326 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ythdf1P59326 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.67■■□□□ 1.06
Ythdf1P59326 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ythdf1P59326 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ythdf1P59326 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ythdf1P59326 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ythdf1P59326 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ythdf1P59326 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Ythdf1P59326 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ythdf1P59326 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ythdf1P59326 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ythdf1P59326 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ythdf1P59326 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms